Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01828 ATGAAACTCAAAAATATCTTTCTATTTTTTTTCTTTATGTTTTTGGAGTGTGTTTTTTTCAAAGTTGAATCAAAATGTGTTAAAGGGTGTGATTTAGCTTTAGCTTCTTACTACATCAAGCCACCATTTGAATTCACAAATATAACAAACTTTATGCAATCAAATTCTGATATCATAATCAGCTACAACAAACAATTAGTATCAAATAATGGTAAACTTTTTTCATTTTCTAGAATCAACATTCCATTCCAATGTGAATGTATTCAAGGTGAATTTCTAGGACATATGTTTGAATACACAACAAATGAAGGAGATACTTATGATTTAATTGCAAATTCATATTATGCAAGTTTGACCACAATTGATCTTTTGCAAAAGTTCAACAAATATGATCATAATCAAACATTGCCTTCTAAAGTTAAGGTTAATGTCACTGTCAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGAATATGGATTGTTTCTTACATATCCACTTAGGTCTAGTGATACTCTTCAGATTATTGCAATTGAATCTAAAGTTGATGAAGTGTTGATACAGAATTATAATCCTAATGTCAATTTCAGCAGAGGCAGTGGGATTGTGTTCATTCCAGGAAGAGATAAAAATGGAGATTATGTTCCTTTGTATCCTAGAACAGGTCTTGCTAAGGGTGCAGCCGTTGGTATATCGATGGCCGGAATATTTGGATTTCTGTTATTTGTTATATGTATTTATGTCAAATACTTTCAGAAGAATGAAGAACAGAACACTAAACTGCTCGAAACTTCTATCGCGCTTTCAACTCAAAGCGCATCTGGTAGTGGAGAATATGAAACTTCAGGATCCAGTGGACATGGTACTAGTAGTGCTGCTGGACTTACAGGAATTATGGTGGCAAAGTCAACAGAATTTTCATATCAAGAACTAGCCAAGGCTACAAATAATTTCAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTTTATTATGCAGAACTTAGAGGCGAAAAAACAGCAATTAAGAAGATGGATGTACAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATTTGGTGCGGTTGATTGGATATTGTGTTGAGGGATCACTTTTCCTTGTATATGAACATATTGACAATGGAAATTTGGGTCAATATTTGCATGGTATAGGTACAGAACCATTACCATGGTCTAGTAGGGTTCAAATTGCTCTAGATTCAGCAAGAGGCCTTGAATACATTCATGAACACACTGTGCCTGTGTATATTCATCGTGATGTAAAATCAGCAAATATATTGATAGACAAAAATTTGCGTGGAAAGGTTGCAGATTTTGGATTGACTAAACTTATTGAAGTTGGAAACTCTACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTATTTATGAACTTATTTCTGCAAAGAATGCTGTTTTGAAGACAGGTGAATCAGTTGCTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAGAAGCACTTAATAAGAGTGATCCTTGTGAAGGTCTTCGCAAACTCGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGACTCTGTTCTCAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGACAATCCACTACTACGACCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTATCATCACCTACTGAGGATTGTGATGATGACACTTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTCAGATGA 1851 0.3501 MKLKNIFLFFFFMFLECVFFKVESKCVKGCDLALASYYIKPPFEFTNITNFMQSNSDIIISYNKQLVSNNGKLFSFSRINIPFQCECIQGEFLGHMFEYTTNEGDTYDLIANSYYASLTTIDLLQKFNKYDHNQTLPSKVKVNVTVNCSCGNSQISKEYGLFLTYPLRSSDTLQIIAIESKVDEVLIQNYNPNVNFSRGSGIVFIPGRDKNGDYVPLYPRTGLAKGAAVGISMAGIFGFLLFVICIYVKYFQKNEEQNTKLLETSIALSTQSASGSGEYETSGSSGHGTSSAAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGIGTEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVIYELISAKNAVLKTGESVAESKGLVALFEEALNKSDPCEGLRKLVDPRLGENYPIDSVLKMAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01828 616 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Car02g01828 616 Gene3D Transferase(Phosphotransferase) domain 1 389 611 - -
Car02g01828 616 SMART serkin_6 318 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01828 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Car02g01828 616 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01828 616 SUPERFAMILY Protein kinase-like (PK-like) 300 588 IPR011009 -
Car02g01828 616 Gene3D Phosphorylase Kinase; domain 1 298 388 - -
Car02g01828 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 616 IPR044812 GO:0019199|GO:0045087
Car02g01828 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 5 616 - -
Car02g01828 616 Pfam Protein tyrosine and serine/threonine kinase 319 584 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01828 Car-Chr2 48467713 48472057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01828 1 616 Receptor kinase-like Gene Family AT3G21630 54.792 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car02g01828 PK_Tyr_Ser-Thr 6.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01828 - K13429 gmx:100776847 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00874 05 47173816 47179501 Car02g01828 02 48467713 48472057 PCT