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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Car02g01817
ATGGatcatcatcatcatcctatgaatatcatgaacatTAATATGGATACAACTAATAGGAAGTTTCATTCTTTTCCTCTCACCACCAACAACTCTTCTCTTCAACAACATCATCATAACTATAACAACACTGCTAATGTTGTTGTTAGAGATAAAATCATGGCTCATCCTCTCTTTCCTCGTCTCTTGTCCTCTTACCTCAATTGTTTGAAGGTTGGAGCACCTCCTGAAGTGGTGGCTAGCTTAGAGGAATCATGTGCAAAATGTGAAACATTGAATGGATCAGGAAGGACAGGAAGTAGTTGTTTAGGTGAAGATCCAGCTTTGGATCAGTTCATGGAAGCTTATTGTGAGATGCTTATTAAGTATGAGCAAGAACTCACTAAACCCTTCAAAGAAGCCATGCTTTTCCTCTCAAGAATTGAGTCTCAGCTTAAGGCTCTTGCTGTTTCAACTGACTTTGGTCAAAGTGAATCACCTTCACATAATGAGATTGATATGCATGAAAACAACCTAGATACACAAGCTGAAGATCAAGAATTGAAAGTGCAACTATTGCGCAAGTATAGTGGATATTTAGGAAGCCTCAAGAAAGAGTTTTTGAAGAAGAAAAAGAATGGAAAGTTACCAAAGGAAGCTAGGCAACAACTACTAGATTGGTGGAACAGGCATTACAAATGGCCTTACCCATCGGAATCCCAAAAGCAAGCACTTGCAGAATCTACAGGACTAGATTTGAAGCAAATAAACAATTGGTTCATAAATCAGAGAAAACGTCACTGGAAGCCTTCTGAGGATATGCAATTTGCTGTGATGGATGCAACAAATTACTATATGGAAAATGTCATGTGCAAGCCTTTTCCCATGGATGCCATGCCTATGCTTCTTTAG
891
0.376
MDHHHHPMNIMNINMDTTNRKFHSFPLTTNNSSLQQHHHNYNNTANVVVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCETLNGSGRTGSSCLGEDPALDQFMEAYCEMLIKYEQELTKPFKEAMLFLSRIESQLKALAVSTDFGQSESPSHNEIDMHENNLDTQAEDQELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRHWKPSEDMQFAVMDATNYYMENVMCKPFPMDAMPMLL
296
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Car02g01817
296
ProSiteProfiles
ELK domain profile.
180
200
IPR005539
GO:0003677
Car02g01817
296
PANTHER
HOMEOBOX KNOTTED-LIKE PROTEIN
8
287
-
-
Car02g01817
296
SMART
KNOX1_2
47
91
IPR005540
GO:0003677|GO:0005634
Car02g01817
296
Pfam
KNOX1 domain
49
90
IPR005540
GO:0003677|GO:0005634
Car02g01817
296
SMART
HOX_1
202
267
IPR001356
GO:0003677
Car02g01817
296
SMART
KNOX2_2
99
150
IPR005541
GO:0003677|GO:0005634
Car02g01817
296
SMART
ELK_2
180
201
IPR005539
GO:0003677
Car02g01817
296
CDD
homeodomain
212
264
IPR001356
GO:0003677
Car02g01817
296
PANTHER
HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
8
287
-
-
Car02g01817
296
ProSitePatterns
'Homeobox' domain signature.
238
261
IPR017970
GO:0000981|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Car02g01817
Car-Chr2
48309814
48314253
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Car02g01817
49
290
Homeobox Transcription Factor Family
AT1G62360
68.093
2.12e-109
320
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-KNOX
Car02g01817
KNOX2
2.7e-22
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Car02g01817
-
-
cam:101495840
577.4
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