Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01814 ATGCTTCTAAACCAAAAATACAATTTATCATATCCATTCTTCAATCTCAACATGTTCTATCACTCAATCTTATTAACACTAATTCTCATCATCACAAAAACACAATCCCAACAAGAATACGTAAACAACAAACAACTCGACTGCGACAACACATACAACTCAACATCAGGCAACATTTGTAACAGCATCCCTTCATGTCAATCATACCTCACTTTCAAATCTACACCCCCCGATTACAACACCCCCCTTTCCATTTCACACCTCCTAAACACCCCACCTTCTCTCATCTCCCAATCCAACAACCTTCAACAACCCATCTCCAATGACACAATCATAACCGTGCCTGTTAACTGTTCCTGCTCTGGCAACGGTAACTACTACCAACACAACTCTACGTACACTTTGAAAACCTTAGGTGAAACTTACTTCTCCGTCGCTAATATAACCTACCAAGCTCTTACCACGTGTCAAGCTCTCATTGCTCAGAATACTTACGGTGTTCGAAACCTCGTTGCTGGTCTCAACATAACCGTTCCTCTTAGATGCGCTTGTCCTACAAAAAAACAGAGTGATCAAGGTTTCAAGTTTCTTCTCACTTATTCAATCTCTGAAGGTGAATCCGTTTCTTCCATTGCTGATCTTTTCGGCGTTGATGAACAAAGCATTATGGAAGCTAACGAACTTTCTACTTCATTAATTTTCTACTTCACCCCCCTTTTAATCCCTCTAAAAAATGAACCCCCTCAAAAATTGACAAAACAAGCTTTACCACCGGAGACTCCGCCTCCGCCGCCACTGGCGACGGATAACGGTGATTCGACCTCTTCCAAGAAATGGGTCATTGTCGGTGTAGCGGTTGGGGTTGTTGTATTACTTCTTCTAGCTCTCTCTGTTTATTTCCTCTGTTTCTATAAACGCCGGCGACGGCAGCCGGAGATACCACCGCCGGGAGTGAAGGCTTTCACAGATTCTGAAACCAATAGGGTTACGGATTTTACCTCAAAAACAGAATCTTGGTCACTTTCTTCTGAGGGGATTCGTTATGCGGTTGACTCGTTGACTTTGTACAAGTTTCAAGATTTGCAAAATGCAACGAAGTTTTTCAGTGAAGAGAACAAGATTAATGGGTCTGTTTATAGAGCTTCTTTTAAAGGTGATGATGCTGCTGTTAAGATTCTTAAAGGTGATGTTTCTTCTGAGATAAACATTTTGAAGAGGATTAATCATGCGAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTGAGAATGATTCTCTTCATGATTGGCTTCATCAATCTGagaagaacaagaacaagaagaaTTCTCAGAATTCTATGATTTGTTTGAGTTGGATTCAGAGAGTTCAGATTGCTTATGATGTAGCGGATGCACTTAATTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAGAATTTGAAAAGTGGTAATATTCTTTTGAATGGAAATTTTAGAGCTAAAGTTTCAAATTTTGGGTTGGCAAGAGTTATGGAGAATGAAGAAGGGAATAATGAAGAGTTTCAATTAACAAGACATGTAATTGGGACTCAAGGTTACATGGCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCTTTTGGTGTTGTGATTTTGGAGATTCTTTCTGGAAGAGAAGTTGCTGGTGGGGTTCAGCTTCTGTCTGTTACTGTGAATCAGGTTCTTGAAGGGGAAAATGTTAGGGAGAAGCTTAGAGGTTTCATGGATCCAAATTTGAAAGATGAATATCCATTGGAACTTGCATATTCAATGGCTGAGATTGCTAAAAGATGTGTTGCTAGTGACCTTAATTTAAGACCAAATGTTTCTGAGGTTTTCATGGTTTTGTCTAAGATTCAATCATCTACATTGGATTGGGATCCATCTGATGAGCTTGAACGGTCTAGATCTGTTGGCCAAGTTTCTGTTAGTAGATAG 2010 0.3896 MLLNQKYNLSYPFFNLNMFYHSILLTLILIITKTQSQQEYVNNKQLDCDNTYNSTSGNICNSIPSCQSYLTFKSTPPDYNTPLSISHLLNTPPSLISQSNNLQQPISNDTIITVPVNCSCSGNGNYYQHNSTYTLKTLGETYFSVANITYQALTTCQALIAQNTYGVRNLVAGLNITVPLRCACPTKKQSDQGFKFLLTYSISEGESVSSIADLFGVDEQSIMEANELSTSLIFYFTPLLIPLKNEPPQKLTKQALPPETPPPPPLATDNGDSTSSKKWVIVGVAVGVVVLLLLALSVYFLCFYKRRRRQPEIPPPGVKAFTDSETNRVTDFTSKTESWSLSSEGIRYAVDSLTLYKFQDLQNATKFFSEENKINGSVYRASFKGDDAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENDSLHDWLHQSEKNKNKKNSQNSMICLSWIQRVQIAYDVADALNYLHNYANPPHVHKNLKSGNILLNGNFRAKVSNFGLARVMENEEGNNEEFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILEILSGREVAGGVQLLSVTVNQVLEGENVREKLRGFMDPNLKDEYPLELAYSMAEIAKRCVASDLNLRPNVSEVFMVLSKIQSSTLDWDPSDELERSRSVGQVSVSR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01814 669 SUPERFAMILY LysM domain 198 242 IPR036779 -
Car02g01814 669 Gene3D Transferase(Phosphotransferase) domain 1 432 659 - -
Car02g01814 669 MobiDBLite consensus disorder prediction 254 268 - -
Car02g01814 669 SUPERFAMILY Protein kinase-like (PK-like) 344 637 IPR011009 -
Car02g01814 669 Gene3D Phosphorylase Kinase; domain 1 329 431 - -
Car02g01814 669 Gene3D LysM domain 186 254 IPR036779 -
Car02g01814 669 ProSiteProfiles LysM domain profile. 198 241 IPR018392 -
Car02g01814 669 ProSiteProfiles Protein kinase domain profile. 364 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01814 669 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 660 - -
Car02g01814 669 CDD LysM 199 231 IPR018392 -
Car02g01814 669 SMART LysM_2 132 179 IPR018392 -
Car02g01814 669 SMART LysM_2 199 242 IPR018392 -
Car02g01814 669 PANTHER PROTEIN LYK5 25 660 - -
Car02g01814 669 Pfam LysM domain 200 242 IPR018392 -
Car02g01814 669 MobiDBLite consensus disorder prediction 250 272 - -
Car02g01814 669 Pfam Protein kinase domain 395 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01814 Car-Chr2 48294794 48297275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01814 22 663 Receptor kinase-like Gene Family AT2G33580 52.367 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car02g01814 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01814 - - gmx:100818534 862.448