Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01810 ATGTTGCAAACTTTGGACTTAAAGGTACTCTTTTCAATCTCAACTTCTCATCTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCCCTATGCTTCAAAGTTTGGATATAATCAACAACTTTTTTCATGGAACTATTCCACACCAAATTGGTAACTTGTCCAAAATTTCTAAACTAAATTTGAGTTATAATCTTTTCAATGGTTCCATTCCACAAGAAATAGGTGCACTAAAAAATCTAAGTCACCTTAATATTGTAAGTTGTAAGCTCACTGGTTCCATTCCCTCAACAATAGGAAAGTTGATAAATCTTGTTGAACTTGATCTTTCAGCTAACTATCTCTATGGTGAAATCCCTTCAATAAGAAACTTGATGAACTTAGAAAAACTTGTTCTCTACGGAAACTCTCTTTCTGGACCAATTCCTAAGGACTTGGGAAGAATCTCTTCACTTAGAACAATCAAATTGTTACAAAATAAATTTTCTGGCCCAATTCCATCATCCATAGGAAACTTGTCCAATTTGAGGACACTTTTGCTAAGTAAAAATTCTCTTAATGGATCAATTCCTTCAACTATTGGAAACTTAACAAAACTCATTCTATTGTCACTTTGTGAAAACCAACTTTATGGATCAATTCCTTCTTCCATAGGAAACTTGGTCAATCTAGAAAGGCTTTGCCTTTCACAAAACAATCTTTTTGGACCTATTCCTTCTACTTTTGGAAATTTGACAAAACTCACTTTTTTATTACTTTACATGAACAAACTCAATGGTAGCTTTTCATCATCGATGAATAACATTACCAATTTGCAAAGCTTACAAATAAGTGACAACGATTTCACTGGCACTTTACCACAGCATATTTGCCTTGGTGGATCACTTACAAATTTTTCAGCTAATAACAATCATTTTAGTGGTTTAGTTCCAATTAGCTTGAAGAATTGTTCTAGCCTTGTTAGACTTAACCTTGAAGAAAACATGTTGAGTGGAAATATTTCAAATGATTTTGGTGTATATCCAAATTTGAGCTACATTTTTCTGAGTCACAATAACTTCTATGGCCAACTTTTATCAAATTTGATAAGTAATAATCTCATTGGTCTAATGATCTCACACAACAATTTATCAGGTACTATACCTCTAGAATTAGTTCAAGCACCTAAGTTACAATCACTTCAACTTTCCTCAAATCATCTTATAGGGAAAATTCCTAAAGAACTTTGTAACTTGACTTCATTGTATGAACTCTCTATAAGTGACAATGAACTTTCTGGCACTATTCCTATAGAAATAGGATCCATGCAAGGACTTCAAATATTGAATCTGGCAGGAAATAATTTGAGTGGCTTAATTCCAAAACAAGTTGGAGATTTGCTCAAATTAGTCCAATTGAATTTGAGCATTAATAAGTTCATGGAAGAAATTCCACTTGAATTTAGCAGATTGCAATCTCTTGAAAATCTTGATCTTGGTGGAAATTTGTTAAGTGGAGAAATACCAAAAGCACTTGGAAAGTTGCAAAAGTTGAACACATTGAACCTTTCACATAATAAACTCATTGGGACTATTCCATCAAATTTTGAGGATATGATCAGCTTGACAAGTGTTGACATATCTTATAACCAATTACATGGTTCAATTCCTAATAATACAGCATTTCTTAAGGCACCATATGAAGCATTGAGAAACAATAAAGGCTTGTGTGGTAATGCCTCAAAATTGTTGCCTTGTCATGAGTTAAGTCACAAAAAAAGTAAAAACAAAAGTGTGGTCTTAGCACTTTTTATTACTTTGAGTATTCTTTTTCTTTTAGCCTTTTTGGTTGGAGTGTCTTTATGTATTCATTGGAAAAGAGCAAGAAAATTCCAAAAACAGTCTACAGAAGAAGAAGAACAACAAACTCAAGATGTTTTTTCCATATGGAGTTATGATGGAAAAATGGTTTATGAAAATATCATTGAAGCCACAGAGGATTTTGATGACAAATATCTCATCGGCGAAGGAGGTTCTGGTTCAGTTTACAAAGCTAACTTACCTTCTGGTCAAGTTGTTGCTGTGAAGAAACTTCATGCAGAAGTTGATAAAGACAATCAAAATTTCAAAGCTTTTACATATGAGGTTCAAGCATTGACACAGATCAAACATCGTAACATTGTGAAGTTGTATGGATTTTGTTCGCATTCGCGCCACTCTTTCGTGGTTTATGAGTTCCTTGAAGGAGGGAGCTTGGATAATGTGCTAAGAAATGAGACACAAGCAACAATGTTTGATTGGAAAAAGAGAGTGAATGTTGTTAAGGGTGTGACAAATTCTCTTTACCATATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGCGACATATCAAGCAAAAATATTCTTTTAGATTTGGAATATGAAGCTTGCATCTCAGACTTTGGAACAGCTAAGATTCTTAATCTTGATTCACATAATTCAACAACATTTGCAGGCACTTATGGCTATGCAGCACCAGAGCTTGCATTTACTCTCAAAGTGAATGAGAAATGTGATGTGTTTAGTTTTGGAGTGCTTTGTTTGGAAATAATCATGGGAAAGCATCCAGGAGATCTCATTTCTACATTGTTTTCATCATCTGAAGCACCAAGAGCATATAATTTGCTATTGAAAGATGTATTAGACCAAAGACTTCCATTTCCAGAAAATTCAGTTGCTAAGGATGTGATTTTGATTGCAAAAATGGCATTTGCTTGCTTGAATGAAAGTCCACGTTCAAGGCCAACAATGGAACAAGTGTATAACATGTCTGTCATGTCAAAATCACCATCAATGGAGACATTCCACATCATCACTCTTGGACAACTTCTAAATTAG 2871 0.3361 MLQTLDLKVLFSISTSHLSXXXXXXXXXXXXXXFPMLQSLDIINNFFHGTIPHQIGNLSKISKLNLSYNLFNGSIPQEIGALKNLSHLNIVSCKLTGSIPSTIGKLINLVELDLSANYLYGEIPSIRNLMNLEKLVLYGNSLSGPIPKDLGRISSLRTIKLLQNKFSGPIPSSIGNLSNLRTLLLSKNSLNGSIPSTIGNLTKLILLSLCENQLYGSIPSSIGNLVNLERLCLSQNNLFGPIPSTFGNLTKLTFLLLYMNKLNGSFSSSMNNITNLQSLQISDNDFTGTLPQHICLGGSLTNFSANNNHFSGLVPISLKNCSSLVRLNLEENMLSGNISNDFGVYPNLSYIFLSHNNFYGQLLSNLISNNLIGLMISHNNLSGTIPLELVQAPKLQSLQLSSNHLIGKIPKELCNLTSLYELSISDNELSGTIPIEIGSMQGLQILNLAGNNLSGLIPKQVGDLLKLVQLNLSINKFMEEIPLEFSRLQSLENLDLGGNLLSGEIPKALGKLQKLNTLNLSHNKLIGTIPSNFEDMISLTSVDISYNQLHGSIPNNTAFLKAPYEALRNNKGLCGNASKLLPCHELSHKKSKNKSVVLALFITLSILFLLAFLVGVSLCIHWKRARKFQKQSTEEEEQQTQDVFSIWSYDGKMVYENIIEATEDFDDKYLIGEGGSGSVYKANLPSGQVVAVKKLHAEVDKDNQNFKAFTYEVQALTQIKHRNIVKLYGFCSHSRHSFVVYEFLEGGSLDNVLRNETQATMFDWKKRVNVVKGVTNSLYHMHHGCSPPIVHRDISSKNILLDLEYEACISDFGTAKILNLDSHNSTTFAGTYGYAAPELAFTLKVNEKCDVFSFGVLCLEIIMGKHPGDLISTLFSSSEAPRAYNLLLKDVLDQRLPFPENSVAKDVILIAKMAFACLNESPRSRPTMEQVYNMSVMSKSPSMETFHIITLGQLLN 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01810 956 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 33 954 - -
Car02g01810 956 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 954 - -
Car02g01810 956 Gene3D Ribonuclease Inhibitor 11 126 IPR032675 -
Car02g01810 956 SUPERFAMILY L domain-like 369 575 - -
Car02g01810 956 SUPERFAMILY RNI-like 39 367 - -
Car02g01810 956 Pfam Leucine Rich Repeat 394 416 IPR001611 GO:0005515
Car02g01810 956 Pfam Leucine Rich Repeat 514 534 IPR001611 GO:0005515
Car02g01810 956 Pfam Leucine Rich Repeat 227 249 IPR001611 GO:0005515
Car02g01810 956 SMART LRR_typ_2 488 511 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 177 201 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 512 535 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 225 248 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 393 416 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 440 464 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 58 82 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 273 297 IPR003591 -
Car02g01810 956 SMART LRR_typ_2 536 561 IPR003591 -
Car02g01810 956 Pfam Leucine rich repeat 418 476 IPR001611 GO:0005515
Car02g01810 956 Gene3D Ribonuclease Inhibitor 296 585 IPR032675 -
Car02g01810 956 SUPERFAMILY Protein kinase-like (PK-like) 644 935 IPR011009 -
Car02g01810 956 Gene3D Phosphorylase Kinase; domain 1 624 743 - -
Car02g01810 956 ProSitePatterns Protein kinases ATP-binding region signature. 671 694 IPR017441 GO:0005524
Car02g01810 956 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
Car02g01810 956 SMART LRR_sd22_2 488 503 - -
Car02g01810 956 SMART LRR_sd22_2 106 131 - -
Car02g01810 956 SMART LRR_sd22_2 512 535 - -
Car02g01810 956 SMART LRR_sd22_2 177 203 - -
Car02g01810 956 SMART LRR_sd22_2 225 251 - -
Car02g01810 956 Pfam Protein kinase domain 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01810 956 ProSitePatterns Tyrosine protein kinases specific active-site signature. 789 801 IPR008266 GO:0004672|GO:0006468
Car02g01810 956 Gene3D Ribonuclease Inhibitor 199 295 IPR032675 -
Car02g01810 956 Gene3D Ribonuclease Inhibitor 127 198 IPR032675 -
Car02g01810 956 ProSiteProfiles Protein kinase domain profile. 665 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01810 Car-Chr2 48207856 48211497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01810 34 841 Receptor kinase-like Gene Family AT4G08850 45.232 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g01810 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01810 - - gmx:100800924 1183.7