Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01806 ATGTTAAGAGCTGGAGAATCATGTTCCTCAAATTCTTCCAATACAAAATACCATGTTTTCTTAAGTTATGATGGAAGAGAAGGTTCACACTTAAAATTCATTAATCAGTTACGTGATTCATTAAAGCGAAAGGAAATCGTAGCTAATATCCCAGATAACAAAGAACATGTGattgaaaagtccctcgctgcaattgtagtattctctaagagctatggttcttgtactttgcgtttggatgaactagaaaagattgtcgaatcaaaaaaggtattaggattagatgtttttccgatcttttatgatgtaactccttctgatgttcgttaccagaaaaatagtttcggtgaggcttttggacaacatatcataagttctgaacaacacaaattcaagatgaagaaatggatagattccttacaccaagttgctgacttatctggCTACGAATCTAAAAATAGGCATGAAAATGATCTCATTGAAGACATTATTAAATCGGTGTGGAAAAAGGTACACCCTAAAATGCCATATTATTCGGACAATGGACTAGTTGGAATTGATTATAGAGCTAATAAATTGGAATCAACTTTAAGAATGAAATTAAAGGAGAAGGTCCATtttgtaggaatatggggcatgggtggcataggaaagacaactctagctagagtcatatttaagaaattacgtaacgaatttgatataagctgcttccttgaaaatgttggggagatttatggtggaagagatggtatagttagcttacaaaaaacacttctttctcatatgaaaatagattttgaaattgaagatttggacgaaagaaataatataatacgagatgtttttggcaacaataaagttctccttgtcattgatggtgttgatgacaaaaaacaactagaggactatgctggaaaaaaagagtggtttggacttgggagtagaatcataataactacaagagacaaacatatactaagatcgtgtggaatagaccaagtttataaaattgaattattaaatttggaagagtcccataaactcttctacgagaaaacatttaataaaggggaagaaccaagtgaacatcatttggagttgtcaaaggttattgtccaatataatgaaggccttcccttgtcccttttaaggttggcctccttttttcgtggtagggaaaaatctcaatggaaagaaattttggacacgacaaaagaattacaagtgattgatgatttttatgtaatgaagacacttagaataagctatgatgggctaccactaatttacaagaccttgtttcttgatattgcatgttttttcaaagggtgggtaaaagatgatgtgatacaaattctaaaaatttgtgaccgttatcgggcagatggaattgaatatctaattgataaatcattagtaacttatgatggattatatttggggatgcatgctttgcttcaagaaatgggaaggaaaattgttcttgaagaatgtattatagatgctgccaaacgaagtagattgtggtctattgaggacattgaccaagcactgaaaagtaataaaGCAATTGAATTGATGATTGAGACTCAGGGTATAGTTTTGAAGCCATCCACTCAGCCATACAGAGCTAATTGGGATCCGGAAGCCTTGTCAAAAATGAGTTATCTTAAATTTCTTATTATTAATTTTCATAATATGCATCTTCCACTTGGCCTAAAATGTCTTTGCACTTCATTGAAATTTCTTCACTGGATGGAGTATCCTTTAGAAGCTTTGCCACTTAGTGTGCAGCTAAATAAACTTGTACACATGAAATTGCCTTACAGCAAAATTAAAAAGATTTGGAAAGGAAATCATAATTTTGCAGAGTTGAAGTTGATTGATCTAAGCCATTCAAAAGATCTAACTCAAACTCCTATTATTTCTGGAGCTCCATGTCTTGAAAGTTTGCTTCTTGAAGGGTGCACAAGCCTTGTTAAGGTTCACAAATCTGTTGGAAAACACAAGAAGCTTGTCATATTGAACTTGAAAGATTGCATAAATCTTCAAACCCTTCCAACAAAATTGGAAATGGATTCCCTAGAGGAGTTGATTTTTTCAGGCTGCAAAAAAGTTAAAAAGCTCCCTAAGTTTGGAAAGAATATGAAATACTTATCAAGGCTTAGTTTGGAGGATTGCAAAAATCTTCTTTGCATACTAACTTTTATTTGCAATATGAAATCTCTTAAAAAGCTTAATATTTCTGGCTGCATAAAAATTTCTAGGCTGCCATACAATATGAATGAAAATGAGTCATTAGAAGAACTTGATGTGAGTGGAACTGCCATAAGAGAAATCACTTCTTCCAAAGTTTGTTTGGAGAATCTTAAAAAACTCATTTGGTGGAAGGAAAGAACTATCCAACTCCAATAG 2418 0.1667 MLRAGESCSSNSSNTKYHVFLSYDGREGSHLKFINQLRDSLKRKEIVANIPDNKEHVIEKSLAAIVVFSKSYGSCTLRLDELEKIVESKKVLGLDVFPIFYDVTPSDVRYQKNSFGEAFGQHIISSEQHKFKMKKWIDSLHQVADLSGYESKNRHENDLIEDIIKSVWKKVHPKMPYYSDNGLVGIDYRANKLESTLRMKLKEKVHFVGIWGMGGIGKTTLARVIFKKLRNEFDISCFLENVGEIYGGRDGIVSLQKTLLSHMKIDFEIEDLDERNNIIRDVFGNNKVLLVIDGVDDKKQLEDYAGKKEWFGLGSRIIITTRDKHILRSCGIDQVYKIELLNLEESHKLFYEKTFNKGEEPSEHHLELSKVIVQYNEGLPLSLLRLASFFRGREKSQWKEILDTTKELQVIDDFYVMKTLRISYDGLPLIYKTLFLDIACFFKGWVKDDVIQILKICDRYRADGIEYLIDKSLVTYDGLYLGMHALLQEMGRKIVLEECIIDAAKRSRLWSIEDIDQALKSNKAIELMIETQGIVLKPSTQPYRANWDPEALSKMSYLKFLIINFHNMHLPLGLKCLCTSLKFLHWMEYPLEALPLSVQLNKLVHMKLPYSKIKKIWKGNHNFAELKLIDLSHSKDLTQTPIISGAPCLESLLLEGCTSLVKVHKSVGKHKKLVILNLKDCINLQTLPTKLEMDSLEELIFSGCKKVKKLPKFGKNMKYLSRLSLEDCKNLLCILTFICNMKSLKKLNISGCIKISRLPYNMNENESLEELDVSGTAIREITSSKVCLENLKKLIWWKERTIQLQ 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01806 805 Gene3D - 10 172 IPR035897 -
Car02g01806 805 Gene3D Ribonuclease Inhibitor 546 692 IPR032675 -
Car02g01806 805 Gene3D - 340 428 IPR042197 -
Car02g01806 805 Gene3D - 173 335 IPR027417 -
Car02g01806 805 ProSiteProfiles TIR domain profile. 15 171 IPR000157 GO:0007165
Car02g01806 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 438 IPR027417 -
Car02g01806 805 SUPERFAMILY "Winged helix" DNA-binding domain 416 520 IPR036390 -
Car02g01806 805 Pfam NB-ARC domain 189 407 IPR002182 GO:0043531
Car02g01806 805 SMART till_3 16 146 IPR000157 GO:0007165
Car02g01806 805 Gene3D Ribonuclease Inhibitor 693 802 IPR032675 -
Car02g01806 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 721 IPR044974 GO:0006952
Car02g01806 805 SUPERFAMILY L domain-like 546 795 - -
Car02g01806 805 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 149 IPR035897 -
Car02g01806 805 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 58 721 - -
Car02g01806 805 Pfam TIR domain 38 186 IPR000157 GO:0007165
Car02g01806 805 PRINTS Disease resistance protein signature 207 222 - -
Car02g01806 805 PRINTS Disease resistance protein signature 282 296 - -
Car02g01806 805 PRINTS Disease resistance protein signature 376 390 - -
Car02g01806 805 PRINTS Disease resistance protein signature 621 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01806 Car-Chr2 48162691 48167899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01806 12 800 WRKY Transcription Factor Family AT4G12020 30.445 8.79e-91 311