Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01799 ATGCAACAAGTGGCAGCAGAAGTTCAGCAACAACAGGTGAAGAAAAAGCAACAAGAAACACAGATGTGTAGGAAGATCAAACTAACTATTTCTGATCACAATAAAAACATCTCATCACatgatgatgatgatgatgatgTTTGTGACAAGATGGACGGCGAGGATCTCTTCATTCCACCTCTCAATTTTGCTATGGTTGATAATGGCATTTTCCGCTCTGGTTTCCCTGAACCATCTAACTTCTCATTCCTTCAAACCCTTGGCCTTCGTTCAATCATATATTTGTGTCCTGAACCATATCCAGAAGCTAACATGGAGTTTCTCAAGTCAAATGGGATCAAGCTTTATCACTTTGGGATTGAAGGCCATAAGGAGCCTTTTGTAAATATCCCAGAAGACACTATCAGGGAAGCACTAAAAGTTCTCCTTGATGTTAGGAACCACCCAGTTATAATTCACTGTAAGCGCGGAAAGGTAAGATTTTGCTTGATTTTTTTATTCTCACTACAAAAATTAGCTGCTTAA 525 0.3771 MQQVAAEVQQQQVKKKQQETQMCRKIKLTISDHNKNISSHDDDDDDVCDKMDGEDLFIPPLNFAMVDNGIFRSGFPEPSNFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYHFGIEGHKEPFVNIPEDTIREALKVLLDVRNHPVIIHCKRGKVRFCLIFLFSLQKLAA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01799 174 Coils Coil 1 21 - -
Car02g01799 174 PRINTS Plant and fungal dual specificity phosphatase signature 113 127 IPR020428 GO:0016791
Car02g01799 174 PRINTS Plant and fungal dual specificity phosphatase signature 94 107 IPR020428 GO:0016791
Car02g01799 174 PRINTS Plant and fungal dual specificity phosphatase signature 130 144 IPR020428 GO:0016791
Car02g01799 174 PRINTS Plant and fungal dual specificity phosphatase signature 57 74 IPR020428 GO:0016791
Car02g01799 174 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 58 160 IPR029021 -
Car02g01799 174 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 10 164 - -
Car02g01799 174 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 174 IPR020422 GO:0006470|GO:0008138
Car02g01799 174 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 164 - -
Car02g01799 174 Gene3D Protein tyrosine phosphatase superfamily 56 172 IPR029021 -
Car02g01799 174 Pfam Tyrosine phosphatase family 58 164 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01799 Car-Chr2 48066551 48070780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01799 28 164 Protein tyrosine phosphatase (PTP) family AT4G03960 61.594 1.09e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01799 K18045 - gmx:100814279 239.58