Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01796 ATGGCGAAAGGGAGAACCGCAGATCCAACGGCGGAACGTGAACCTATGAAAAGCCCGGCGAACGAGCCGCGTTACCGCGGCGTCAGGAAGCGACCATGGGGCCGATTCGCAGCCGAGATTCGAGATCCATGGAAAAAAGCCCGTGTTTGGTTAGGTACTTTTGATTCCGCCGAAGAAGCGGCCCGGGCTTATGATACCGCGGCCCGTTCCTACCGTGGGCCTAAAGCCAAAACCAATTTTCCTCTCCCCGAGGAAGAAaacaaccacaacagcaacaacaacaTCCCTAATCATCAGATTCCTCTTACTCCTAACCGTGTTGGGCTTTCGAAGTTGGATCCGGTTCAGGTTAATTGGCCCACTAGTAGCGGTATGAGTAGTACCGTCGAATCGTTTAGTGGACCTAGGGTTCCTTCTTCTTCTACAACAATTTCTAGGGTTCATCATGCTCCTAGACCTATTGTTCCTATTGCTGATTGTCACAGTGATTGTGATTCTTCTTCTTCCGTTGTTGATGATCAGGATTTTGTCCTCACTTCATCAGTTCGGAAACCGCTCAACATCGATCTCAACCTCCCTCCTCCCAATTCCGATGATGAAGACGAGATCCGAGTCACCGCCTTATGCCTCTGA 633 0.4882 MAKGRTADPTAEREPMKSPANEPRYRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDTAARSYRGPKAKTNFPLPEEENNHNSNNNIPNHQIPLTPNRVGLSKLDPVQVNWPTSSGMSSTVESFSGPRVPSSSTTISRVHHAPRPIVPIADCHSDCDSSSSVVDDQDFVLTSSVRKPLNIDLNLPPPNSDDEDEIRVTALCL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01796 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 17 185 - -
Car02g01796 210 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 185 - -
Car02g01796 210 MobiDBLite consensus disorder prediction 126 146 - -
Car02g01796 210 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Car02g01796 210 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Car02g01796 210 MobiDBLite consensus disorder prediction 74 102 - -
Car02g01796 210 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Car02g01796 210 MobiDBLite consensus disorder prediction 83 102 - -
Car02g01796 210 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Car02g01796 210 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Car02g01796 210 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Car02g01796 210 MobiDBLite consensus disorder prediction 1 29 - -
Car02g01796 210 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Car02g01796 210 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01796 Car-Chr2 47980558 47981839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01796 20 210 AP2-EREBP Transcription Factor Family AT1G50640 48.293 1.60e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g01796 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01796 K09286 - gmx:100795557 205.297