Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01791 ATGGGAACTCTTTCACTACTGCATAATCTTAACGTCTTCTTTCTCTCTCCGCAAAACCCCATTCTCTCACACCATTCTTCTCCTTCTCCTCCCCTTTCCCTCAAACCCCTTACTTTCCACTGTTCCAAATCTTCCCACATTCCCGCTCTTTCTCCATCCACTCCCCTCCGCATTCCACGCACCATCAGAATCGAAGCTCGACGCGCCTTAATGGATTACCTTCACTTCACACGAAATTACACTTTCATACACGCTGAATTCGTCACCAATAATTCTCCACATTTCATCAACTCCCTTATCTCCAAAATCAACCTCAACAAAAACGGCGACGTTTTTCGATCTATCAGGAAGTACCTTAGATATAACCCTATCAACGAATTCGAACCTTTTCTCGAGAGTTTAGGTATTAATCAATCCGAATTGCAATCCATTCTCCCTAGTCGCACCGTTTTTCTTAGTGATGATACTCTTTTAAGTGATAATTTTCGTTGCTTGTATAATCACGGTGTTCCCAGGAATCGAATTGGGAAAATTTATACCCAAGCAAGAGAGGTTTTTCGGTTTGAAAATGGCGTTTTGGCGAAGAAATTCCAAGATTATCAAGGTTTGGGTTTGAGTAAATCAACTGTTATTAAGCTTTTTGTTTGTTGTCCTTTGCTTTTGGTTGGTGATGATGTTGATTCTGTGTTTGTTGCTGTTCTTGATTGGTTGAATAGAATTGGGATTGAAAGTGAATGGATTGCGCATTGTATGTCTTGTTCAAAAAATTATAGTTGGAAAACAATGCTTGATAGCATAGAGTTTCTTCATCAAGTTGGATATTCTGAGAAACAGATGTATACTTTGTTTAAGGAAGATCCTAAGTTGTTGTTGGATGGTTTTGGTAAGAAGATGTATTTGTTATTGGCTCGGTTGATTAAGTCAGGCGTTGAGGTGAATGTGATTTCTTCTTGTTTCATAGAGCATCCTTCTATTTTGTCAAGTAAGTGTGTGGAGAATGTGATGAATGTGATTTCTTTTTTGTATAATATTCGAATGGAACAGGATGATATTGCTTGTGTTTTGTCTAAGTACATGCATGTTCTGAGCAAACATTCGATAAAAGGTCATAAAACTGTTTGCAAGGAGTTAGGAATCGGAAAAGCTGAATTATGCCAAATCATAAAGGATGATCCACTAGAGTTTATTAGATTGGCTTCGAAACCGGAACAGAAGGGGACTAGAAGGGACTACAATGAAGACCCGCGTCGTTATTTGGAGAAAACAACTTTCTTGTTGAAATTGGGGTATCTTGAGAACTCTGAGGAGATGGAAGAAGCGGTGAAGGTGTTTAAAGGGAGAGGTGATGAGTTACAAGAGAGATTCGATTGCCTGGTAGAAGCTGGTTTGGATTATAACAGAGTGGTTGAAATGATAAAGCGAGTTCCTGTGATTCTAAATCTGAAGAGAACTTTAATTCAAAAGAAGATTGATTTCTTAATAAATGTTTTAGGTTACCCAATAGAATGTCTTTTGGGATACCCGACATACTTTTGCCATGATTTGGACAAAATTACTGCAAGATTTTCAATGTATGAGTGGTTGAAGACGAGGAATGCAATAAATCCTGAGTTAAACTTGAGTAGCATAGTTTCATCTAATGAAAAACGGTTTGTAAAATACTTTGTGAATGTGCATCCTGAAGGTCTATACCTTGTTACACCAAGGTCATGGAAGTATTGGAAGCGGTTACAATACATCAACTTAGAATGGGATTCTTGA 1761 0.381 MGTLSLLHNLNVFFLSPQNPILSHHSSPSPPLSLKPLTFHCSKSSHIPALSPSTPLRIPRTIRIEARRALMDYLHFTRNYTFIHAEFVTNNSPHFINSLISKINLNKNGDVFRSIRKYLRYNPINEFEPFLESLGINQSELQSILPSRTVFLSDDTLLSDNFRCLYNHGVPRNRIGKIYTQAREVFRFENGVLAKKFQDYQGLGLSKSTVIKLFVCCPLLLVGDDVDSVFVAVLDWLNRIGIESEWIAHCMSCSKNYSWKTMLDSIEFLHQVGYSEKQMYTLFKEDPKLLLDGFGKKMYLLLARLIKSGVEVNVISSCFIEHPSILSSKCVENVMNVISFLYNIRMEQDDIACVLSKYMHVLSKHSIKGHKTVCKELGIGKAELCQIIKDDPLEFIRLASKPEQKGTRRDYNEDPRRYLEKTTFLLKLGYLENSEEMEEAVKVFKGRGDELQERFDCLVEAGLDYNRVVEMIKRVPVILNLKRTLIQKKIDFLINVLGYPIECLLGYPTYFCHDLDKITARFSMYEWLKTRNAINPELNLSSIVSSNEKRFVKYFVNVHPEGLYLVTPRSWKYWKRLQYINLEWDS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01791 586 Pfam mTERF 125 222 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 Pfam mTERF 451 551 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 Pfam mTERF 266 446 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 Gene3D Transcription termination factor 3, mitochondrial 99 231 IPR038538 -
Car02g01791 586 Gene3D Transcription termination factor 3, mitochondrial 296 564 IPR038538 -
Car02g01791 586 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 50 564 - -
Car02g01791 586 PANTHER CGI-12 PROTEIN-RELATED 50 564 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 SMART mt_12 176 206 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 SMART mt_12 211 243 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 SMART mt_12 434 464 IPR003690 GO:0003690|GO:0006355
Car02g01791 586 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01791 Car-Chr2 47929122 47931262 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car02g01791 mTERF 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01791 - - gmx:100803162 679.863