Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01788 atgataaCACAAATTATGATGATGAGTTGCAAAGCTGGGAATGTACCAGCAGTAATTGTTTTTGGTGACTCTTCGGTTGATTCTGGAAACAACAATAAAATTGCAACGGTTCTCAAAAGCAATTTCAAACCCTACGGCCGTGACTTCGAAGGCGGCCGCCCGACCGGACGCTTCTGCAACGGTCGTGTTCCGCCTGATTTCATTGCCAAGGCTTTCGGCGTTAAGGACGCTATACCAGCTTATTTGGATCGTGCTTATACAATTGAAGATTTTAAGACTGGCGTTTGTTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGCTGTACTAAATGTGATACCACTATGGAAGGAAATAGAATTCTACAAGGAGTATCAACATAAATTGAGATACCATGTTGGTGAAGAGAAGGCAAATGAAATCATAACCGAAGCATTATATCTAATAAGCTTAGGAACAAATGATTTCCTTGAAAATTATTATGTTTTACCAAAACGACAATTCCATTTCACCATATCACAATATCAAAATTTTCTAGTTGGTATTGCTGAGAATTTCATTAGAAAATTGTATACACTTGGTGCTAGGAAATTATCCATAACTGGTCTTGTTCCTATAGGGTGTCTTCCATTAGAGAGGGCTACAAATTTTTTTGGTGACTTTGGTTGCAATGAAAATTACAACAAAGTGGCTTTGCAATTTAATGCAAAGTTGGAGAAAATGATATCAAAGTTAAATAGGGAGCTCCCACAATTGAAAGCCTTGTCAGCAAATGCATATGACATTATCCATGATGTTATTACAAGACCTTCCttttatgGATTTGAGGTGGTAGAGAAAGCATGTTGTTCAACTGGAACATTTGAGATGAGTTACTTATGCAGTGAGAAGAATCCATATACATGCAAAGATGCAAACAAATATGTGTTTTGGGATGCCTTTCATCCTACTGAGAAGACTAATCGCATTGCCTCTAATTTTTTAATACCCAAACTTCTAGCAGCTTTTAAATGA 1020 0.3696 MITQIMMMSCKAGNVPAVIVFGDSSVDSGNNNKIATVLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAKAFGVKDAIPAYLDRAYTIEDFKTGVCFASAGTGYDNATSAVLNVIPLWKEIEFYKEYQHKLRYHVGEEKANEIITEALYLISLGTNDFLENYYVLPKRQFHFTISQYQNFLVGIAENFIRKLYTLGARKLSITGLVPIGCLPLERATNFFGDFGCNENYNKVALQFNAKLEKMISKLNRELPQLKALSANAYDIIHDVITRPSFYGFEVVEKACCSTGTFEMSYLCSEKNPYTCKDANKYVFWDAFHPTEKTNRIASNFLIPKLLAAFK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01788 339 Pfam GDSL-like Lipase/Acylhydrolase 18 328 IPR001087 GO:0016788
Car02g01788 339 CDD SGNH_plant_lipase_like 16 333 IPR035669 -
Car02g01788 339 PANTHER GDSL ESTERASE/LIPASE EXL3 4 338 - -
Car02g01788 339 Coils Coil 237 257 - -
Car02g01788 339 SUPERFAMILY SGNH hydrolase 18 334 - -
Car02g01788 339 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 338 - -
Car02g01788 339 Gene3D SGNH hydrolase 6 336 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01788 Car-Chr2 47907288 47911543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01788 13 331 Pollen Coat Proteome AT1G75910 37.963 1.39e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01788 - - gmx:100805486 578.941