Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01761 ATGTCCAGAGAAAGGGAGAGATATTTGGATGAGATAGGAAAGAAGAAAGAAGGAGATGGTTGTTTTAAAAAGGGAAGAATGTTAGGAGGTTCTGGAACATTAAATACAACAACACCTTGTGCAGCATGTAAGCTTTTGAGAAGAAGGTGTGCACAAGAATGCCCTTTTTCTCCATATTTCTCTCCTCATGAGCCTCAGAAGTTTGCTTCTGTACACAAAATTTTTGGTGCCAGCAATGTCTCAAAGATGCTAATGgaagtaagtgagaaccaaagagcagatgcagcaaatagtcttgtttatgaagctaatgtaaggctaaGAGATCCAGTTTATGGTTGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAATCATTACTAAGTGAACTTAATGCTATAAGGGAAGAAATACATAAATATAAACTCATAGAAGCTAACATGCTTCCTTCTTCTGAAGCTACTGTTTCAATTGCTACTCTTCCAACACCTTCAACAACAACACTACCAATGCTTCCTTCTTCCATTTACACACAACAAGATAATCCTACCAATTATAACACAATTTCAACTGATCATATTTCCTATTTTAATTAA 600 0.32 MSRERERYLDEIGKKKEGDGCFKKGRMLGGSGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKIFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLLSELNAIREEIHKYKLIEANMLPSSEATVSIATLPTPSTTTLPMLPSSIYTQQDNPTNYNTISTDHISYFN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01761 199 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Car02g01761 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 27 199 - -
Car02g01761 199 Pfam Lateral organ boundaries (LOB) domain 39 135 IPR004883 -
Car02g01761 199 Coils Coil 118 138 - -
Car02g01761 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 27 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01761 Car-Chr2 46717081 46719072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01761 27 170 AS2 family AT2G40470 75.000 2.56e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g01761 LOB 1.8e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01761 02 46717081 46719072 Car02g01761 02 46717081 46719072 ECH