Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01760 ATGAATATAAGTTTCCATGAtttactcttcctttttcttcttacaatcttttccttttccATCTTAGCTTTTGGAGCCACTTTATCCAAAGATGAAGTGGAAGCTCTAAAAGATATAGCTAACACACTTGGGAAGAAAGATTGGGATTTCAGTGTAGATCCATGTAGTGGAGAACAAAATTGGACATCTTCTGTTCAAGTGAAAGGGAGTGAAAATGCCGTCACATGTAATTGTTCCTTTGTCAACAACACTATTTGTCATGTCACTAACATACTCTTGAAACAACAAAATCTCCCGGGCACTCTTCCACCAGAATTGATCAGGTTGCCTCATCTTCAAGAAATTGACTTTACCCGCAATTACTTGAATGGTACAATTCCTAAAGAATGGGGCTCCATGAATCTAGTTAACATCTCCCTCCTTGGAAATCGATTAACTGGTTCAATACCAATAGAAATAACAAACATATCCACTCTCCAAAGTTTGGTATTGGAGGCCAATCAATTATCTGGCAATCTTCCTCTTGAGCTTGGGAATCTAACTCAGATTCAAAGACTGTTACTTTCTTCCAACAATTTCACTGGACAACTACCTGCTACAATGGTCAAACTTACCACATTGCAGGATATTCGAATTTCTGACAATCAATTCACTGGGAAGATACCTGATTTTATTCAAAGCTGGACAAGTCTACAAAAATTAGTGATTGAAGGGAGTGGATTAAGTGGACCAATTCCTTCTGGAATTTCAAATTTGAAAAATTTAACTGACTTGAGAATCAGTGATTTAAATGGCTCTGAACATTCACCTTTTCCACAACTTAATGATATGAACCTGAAATATTTGATTCTAAGAAGTTGCAACATCAATGGAACACTACCTTCATTTCTTCGGACACTCACTAGTCTAAAAAACTTAGATCTCAGCTTTAACAAATTGAGTGGACCAATTCCAAGTAACTATGATGCCCTAAGAAAAGTGGATTTCATATATTTTACTGGAAACCGTCTCACTGGACCAGTTCCTTCATGGTCTGAGAAAGCTGACAACCTAGATCTTTCATACAATAACTTCAGTATAAGCCAAGGGAATCCGACATGTCAAGATAGAAAAGTGAACTTGTTTTCTAGTTCTTCGAGCCGCAACAACTCAGGAATCGTTCCATGTTCGACAGCCTTTATGACCTGTCCTAAAACCTCATATGGTCTTCATATAAACTGTGGTGGAAATTCGGTACAGGTAAATGGAACAACATATGATGAAGATTTAGATCCAGCAGGAGCAGCTAGGTTCTACCAAAGTGGAAATAATTGGGCATTTAGCACCACTGGTAACTTCATGGATAATGATGTTGGAGACTATAATATTTGGTCAAGTAAATCATCATCACTTTCTTTGACCAATGCTGAACTATTCACGAAAGCAAGAGTTTCTCCCACATCTTTGACATATTATGGATTTTGCTTGGGAAATGGAAACTACACAGTAAATCTACATTTTGCAGAAATCATGTTTACTAATGATCAAACATTTAACAGTCTAGGAAGGCGCATATTCGATATATATATTCAGGGAACACTAGTACATAAGGACTTCAATATTGCAAAAGAAGCAGGAGGAGTTGATAAGGCAGTCACAATGTCATTCCCTGCCATTGTGACAAATAGCACCTTGGAGATTCGCTTATATTGGGCAGGAAAAGGGACAACTAGTATACCATTTAGATCGGTATATGGTCCTCTTATATCAGCTATATCAGTCAAATCAGATTTTCCACCTCCTTCTGAAAATGGAAGCAGCATATCTGCAGGAGTTGTGGTTGGAATAGTAGCTGCAGTAGCAATTGTTATCATCTTATTGTTTGGTATACTTAGGTGGAAAGGCTGCTTAGGAAAAAAAAACTCTTTAGAATCAGAGGTAAAGCGTTTAGACCTACAAATGAATTTATTTAACCTAAGACAAATCAAAGGAGCAACAAATAACTTTGATGTTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCAGTATACAAGGGACGTTTATCAGATGGAACATTGATAGCAGTGAAGCAACTTTCTGCTAAATCAAAGCAAGGGAATCGGGAATTTTTAAATGAAATCGGCATGATTTCGGCTTTGCAGCACCCTCATCTTGTTAAACTCTATGGATGTTGTGTAGAGGGAGATCAGTTAATTCTAATATATGAATATCTGGAAAATAATAGTCTTGCTCGTGCTTTATTCGGGCCTCAAGAGCACCAAATAAAATTGAATTGGTCAACAAGATACAAGATTTGTGTTGGTATTGCTAGAGGTTTAGCGTATCTCCATGAAGAATCAAGGTTGAAGGTTGTTCATAGGGACATTAAAGCCACTAATGTGTTGCTTGATAAAGATCTTAATCCAAAAATATCCGATTTTGGTTTGGCTAAACTTGACGAAGAAGAGAACACTCACATTAGCACTCGAATAGCCGGAACATATGGGTACATGGCTCCAGAATATGCAATGCATGGTTACTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTGGCCTTAGAAATCATACATGGAAAGAACAATACTACTATTCGACAAAAAGAAGAAGCATTCCATCTTCTTGATTGGGCACATCTCTTGAAAGAGAAAGGTGATCTAATAGAGCTAGTTGATAAAAGATTGGGTACAAATTTCAACAAAGAGGAAGCAATGGTGATGATAAATGTGGCCCTCTTATGCACTAATGTGACTTCAAATCTTAGGCCTGCCATGTCTTCAGTGGTAAGCATGCTTGAAGGTACAATAGATATTCAGGAAGTGTTTACAGAGTCAAGTGAGGTATCGGATGAGAAGAAAATGGAAGCAATGAGACAATATTACCAAGAACATAGCATTCAAATGGAAGGGCCATGGACTGCTTCATCTACTTCAGCAAATGATCTTTATCCTGTACACCTAGATTCTTCTTACTTGGAGAAGAGAAGTTAA 2994 0.3707 MNISFHDLLFLFLLTIFSFSILAFGATLSKDEVEALKDIANTLGKKDWDFSVDPCSGEQNWTSSVQVKGSENAVTCNCSFVNNTICHVTNILLKQQNLPGTLPPELIRLPHLQEIDFTRNYLNGTIPKEWGSMNLVNISLLGNRLTGSIPIEITNISTLQSLVLEANQLSGNLPLELGNLTQIQRLLLSSNNFTGQLPATMVKLTTLQDIRISDNQFTGKIPDFIQSWTSLQKLVIEGSGLSGPIPSGISNLKNLTDLRISDLNGSEHSPFPQLNDMNLKYLILRSCNINGTLPSFLRTLTSLKNLDLSFNKLSGPIPSNYDALRKVDFIYFTGNRLTGPVPSWSEKADNLDLSYNNFSISQGNPTCQDRKVNLFSSSSSRNNSGIVPCSTAFMTCPKTSYGLHINCGGNSVQVNGTTYDEDLDPAGAARFYQSGNNWAFSTTGNFMDNDVGDYNIWSSKSSSLSLTNAELFTKARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFTNDQTFNSLGRRIFDIYIQGTLVHKDFNIAKEAGGVDKAVTMSFPAIVTNSTLEIRLYWAGKGTTSIPFRSVYGPLISAISVKSDFPPPSENGSSISAGVVVGIVAAVAIVIILLFGILRWKGCLGKKNSLESEVKRLDLQMNLFNLRQIKGATNNFDVANKIGEGGFGPVYKGRLSDGTLIAVKQLSAKSKQGNREFLNEIGMISALQHPHLVKLYGCCVEGDQLILIYEYLENNSLARALFGPQEHQIKLNWSTRYKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIIHGKNNTTIRQKEEAFHLLDWAHLLKEKGDLIELVDKRLGTNFNKEEAMVMINVALLCTNVTSNLRPAMSSVVSMLEGTIDIQEVFTESSEVSDEKKMEAMRQYYQEHSIQMEGPWTASSTSANDLYPVHLDSSYLEKRS 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01760 997 SUPERFAMILY Protein kinase-like (PK-like) 646 954 IPR011009 -
Car02g01760 997 Coils Coil 633 653 - -
Car02g01760 997 CDD STKc_IRAK 668 935 - -
Car02g01760 997 Pfam Protein tyrosine and serine/threonine kinase 664 932 IPR001245 GO:0004672|GO:0006468
Car02g01760 997 Gene3D Ribonuclease Inhibitor 266 367 IPR032675 -
Car02g01760 997 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
Car02g01760 997 ProSiteProfiles Protein kinase domain profile. 662 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01760 997 Gene3D - 399 590 - -
Car02g01760 997 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 289 - -
Car02g01760 997 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 382 954 - -
Car02g01760 997 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 288 343 - -
Car02g01760 997 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01760 997 Gene3D Transferase(Phosphotransferase) domain 1 738 961 - -
Car02g01760 997 Pfam Malectin domain 403 585 IPR021720 -
Car02g01760 997 SUPERFAMILY L domain-like 77 342 - -
Car02g01760 997 Gene3D Phosphorylase Kinase; domain 1 629 737 - -
Car02g01760 997 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 954 - -
Car02g01760 997 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 288 343 - -
Car02g01760 997 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 289 - -
Car02g01760 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Car02g01760 997 Gene3D Ribonuclease Inhibitor 200 265 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01760 Car-Chr2 46704476 46714409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01760 22 982 Receptor kinase-like Gene Family AT1G53420 56.982 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car02g01760 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01760 - - cam:101501658 1758.81