Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01740 ATGGACACTACTACTAGAGAGAAGAACAACAATACTCACCAAGTTTTGACACTTGGGATGAGAAATGCAGCAGAAAGGAACAATTTTTACAACAACCCACTTCATTTTTTCAGATTATGTTTCAGTTGCATCTTCTGGATCCATTTTTTATGGTTTCTTTTGCTTCCTGTGAAGCCCGTTTTGTGTGAAGAACGTTGGGATGGAGTAGTTGTAACACAGTCAAACTTCTTAGCACTTCAATCATTCAAAGAAGAGTTGGTTGATCCAAAAGGGTTCTTGAGAAGCTGGAATGATAGTGCCTATGGAGCTTGTTCTGGAGCTTGGGTTGGCATTAAATGTGCTCAAGGACAAGTTATTGTAATCCAGCTTCCATGGAAAGGGTTGAAGGGAAGAATCACTGATAGGATTGGTCAACTTGAAGGTCTTAGAAAGCTTAGTCTTCATAATAACCAAATTGGTGGTTCAATCCCTTCATCATTAGGACTTCTCCTTAATCTAAGAGGAGTTCAACTCTTTAATAATCGATTAACTGGTTCGATCCCTCCTTCATTAGGTTCTTGTCCTTTGCTTCAATCTTTAGACTTGAGTAATAATTTGCTAACAGGAACAATCCCTTTGAGTCTTGGTAATTCCACTAAGCTTTATTGGCTTAACTTGAGCTACAATTCATTCTCTGGCCCAATACCAACTAGCTTAACTAGTTTGAGTTCTCTCACCTTCATATCTCTTCAACACAATAATCTCTCAGGTTCTATTCCTTCTTCTTTTGGTAACTTAAGGGAACTTAGAGAGATTACTCTTAGTAATAACAAGTTTAGTGGAACTTTACCAAATGAAATAGGAAGTCTTTCTAGACTTAAAAGAGTAGATTTTTCTAATAATGCCTTGAATGGAAGTTTACCTGTCACTCTCTCTAATTTATCATCACTCACAGTGTTGAATGTAGAGAACAACCACCTTGGCAATCAAATTCCAGAAGATTTAGGCAGATTACATAATCTATCTGTGTTAGTATTAAGTAGAAACCAATTTAGTGGCCATATTCCTCAAAGTGTTGGAAATATTTCAAAACTTACACAGTTTGATTTGTCGTTGAATAATCTTAGTGGACAAATTCCAGTCTCCTTAGGCAATCTTAATAATCTTAATTTCTTTAATGTTTCTCAGAATAACCTCTCTGGTCCTGTTCCAACCTTATTAGCACAGAAGTTTAACTCAAGTTCATTTGTGGGAAATATTCAACTATGTGGTTATAGTCcttcaactccatgtccctctccagctccttctGAAGGACACCCTGCTGCGCCTTCTGAAGCATCAAAACACCGTCATCACAAGAAACTAGGTACCAAAGACATAATCCTCATAGTAGCAGCAGTGCTCCTTGTAATCCTGCTTATAGTCTGCTGCATCCTGCTCTTCTGCCTGATCCGGAAAAGAAGAACATCAAATGCTGAGGATGGCCAGGCCACAGGGAGATCTACTGCTGCTGCTACGAGGACAGGAAAAGGAGTCCCTCCTATCGCCGGAGAAGTCGAAGCGGGTGGTGAAGCTGGAGGCAAATTGGTTCATTTCGATGGACCGCTGGCTTTTACAGCAGACGATCTCTTGTGTGCAACAGCCGAGATAATGGGAAAGAGCACCTATGGAACAGTGTATAAGGCGACATTAGAGGACGGTAGTCAAGCCGCAGTGAAACGATTGAGGGAAAAGATCACCAAGAATCAGAGAGAATTTGAATCCGAAGTTAGTGTTCTGGGGAGAATTAGACACCAAAATCTTTTAGCACTAAGAGCCTTTTACTTAGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTTCTTCTTTCCTCCATGCTCGAGGACCCGAAACAAAAATCGATTGGCCAACAAGGATGAACATAGCACAAGGCATGGCTCGCGGCTTGCTTTACCTACATTCACACGAGAACATTATACACGGGAACTTAACTTCAAGCAATGTGTTGCTTGATGAGAACACAAATGCTAAAATAGCAGACTTTGGTCTATCAAGGTTGATGACAACTGCTGCTAACTCTAACGTGATTGCTACAGCAGGAGCATTAGGATACCGAGCGCCCGAGTTATCGAAGCTTAAGAAAGCAAACACGAAAACCGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTACTAACAGGGAAGCCACCTGGTGAGGCAATGAATGGTGTGGATTTACCTCAGTGGGTTGCCTCTATTGTTAAAGAGGAGTGGACAAATGAGGTTTTTGATGTTGAGTTGATGAGAGATTCATCATCATCAACAAATGGGGATGAGTTGTTGAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCGGCACGGCCAGAAGTTCAGATAATCCTTCAGCAGTTGGAAGAGATTAGACCATTGTTATCATCAGCAATTTCTAGTGATGAAGGAGCTATACCTTCCATGAGTGAATAA 2499 0.3994 MDTTTREKNNNTHQVLTLGMRNAAERNNFYNNPLHFFRLCFSCIFWIHFLWFLLLPVKPVLCEERWDGVVVTQSNFLALQSFKEELVDPKGFLRSWNDSAYGACSGAWVGIKCAQGQVIVIQLPWKGLKGRITDRIGQLEGLRKLSLHNNQIGGSIPSSLGLLLNLRGVQLFNNRLTGSIPPSLGSCPLLQSLDLSNNLLTGTIPLSLGNSTKLYWLNLSYNSFSGPIPTSLTSLSSLTFISLQHNNLSGSIPSSFGNLRELREITLSNNKFSGTLPNEIGSLSRLKRVDFSNNALNGSLPVTLSNLSSLTVLNVENNHLGNQIPEDLGRLHNLSVLVLSRNQFSGHIPQSVGNISKLTQFDLSLNNLSGQIPVSLGNLNNLNFFNVSQNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTPCPSPAPSEGHPAAPSEASKHRHHKKLGTKDIILIVAAVLLVILLIVCCILLFCLIRKRRTSNAEDGQATGRSTAAATRTGKGVPPIAGEVEAGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNQREFESEVSVLGRIRHQNLLALRAFYLGPKGEKLLVFDYMPKGSLSSFLHARGPETKIDWPTRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDSSSSTNGDELLNTLKLALHCVDPSPSARPEVQIILQQLEEIRPLLSSAISSDEGAIPSMSE 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01740 832 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Car02g01740 832 CDD STKc_IRAK 545 812 - -
Car02g01740 832 SUPERFAMILY Protein kinase-like (PK-like) 543 815 IPR011009 -
Car02g01740 832 Gene3D Ribonuclease Inhibitor 306 425 IPR032675 -
Car02g01740 832 Gene3D Ribonuclease Inhibitor 73 233 IPR032675 -
Car02g01740 832 Pfam Leucine rich repeat N-terminal domain 77 113 IPR013210 -
Car02g01740 832 Gene3D Transferase(Phosphotransferase) domain 1 617 824 - -
Car02g01740 832 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 243 819 - -
Car02g01740 832 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 257 - -
Car02g01740 832 ProSiteProfiles Protein kinase domain profile. 539 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01740 832 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 257 - -
Car02g01740 832 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 243 819 - -
Car02g01740 832 Gene3D Phosphorylase Kinase; domain 1 545 616 - -
Car02g01740 832 Pfam Protein tyrosine and serine/threonine kinase 542 809 IPR001245 GO:0004672|GO:0006468
Car02g01740 832 SMART LRR_typ_2 139 163 IPR003591 -
Car02g01740 832 SMART LRR_typ_2 307 331 IPR003591 -
Car02g01740 832 SMART LRR_typ_2 259 283 IPR003591 -
Car02g01740 832 SMART LRR_typ_2 235 258 IPR003591 -
Car02g01740 832 MobiDBLite consensus disorder prediction 424 444 - -
Car02g01740 832 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Car02g01740 832 SUPERFAMILY L domain-like 118 400 - -
Car02g01740 832 Gene3D Ribonuclease Inhibitor 234 305 IPR032675 -
Car02g01740 832 MobiDBLite consensus disorder prediction 486 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01740 Car-Chr2 46509986 46513988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01740 27 814 Receptor kinase-like Gene Family AT3G51740 60.654 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car02g01740 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01740 - - gmx:100811174 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01740 02 46509986 46513988 Car02g01740 02 46509986 46513988 ECH