Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01737 ATGGGTGCTGCTTACGAACAAAGTGGTAATGTTTTTCTTGCGCCTATTGAAACTTCTAGAAAGAGGAAAACTAGGAGTAGAGGAAAAGGTACAAGATCTGTGGCTGAGACTATTGCAAAGTGGAAGGAATACAATGAGCATATTTATGCTGCTGCTGGTAAAGATGATGCTAAACAGAAGCGGAAAGCACCGGCGAAAGGATCAAAGAAAGGTTGTATGAAAGGTAAAGGAGGACCTCAAAACTCAGAGTGTAATTATAGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGGTGAAATCAGGGAACCAAATAGAGGCAAAAGACTTTGGTTAGGTACTTTTTCTACTGCTCAAGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCTATGTATGGTCCTTCTGCACGTCTTAACTTCCCTCATGTATCAGATTATAGTTCTATTAAGGAGTCTTTGAAGGAATCGACCGCTGCTAGCTATTCTTGTTCTTCAGTTGCAACTACTCCTGCAACATCTGAGATAACAACTGTATCTAGTCATTCTGATGTTTTTGCTGTTGAGGATGTTAAGGAGATACCAAAACCTGTCAATATGAAAAATGATAATACTGTTGCTGTTTATCGCGAGGTTTATGAAGCTAGCTCTCCAATTAGTAGAATGAAGCAAGAGCCTAAAGATGAGCCTGCTGATATTATAGACCCTGGAGGTGGGGAAATCCAAGACGGAAAATCAGAAGGAAATCAAACACAGACACTAACACATGATGTACAGATTGGAGAGGGTGTATGTAATGGCCAGATGGATCTTTCATGGATTGATGACTTTGACTTCAATGGTGATTACTTGAAGAGCTTTTCAATGGATGAGTTATTTCAGGTGGATGAGCTCTTGGGGCATATAGATAACAATCCAATTGATGAATCTGGGTTGGTGCGAAGTTTGGATTTTGGACAAATGGGTTTTCCTGAACAAAGTAATCCTCAGGTTGGGACTTCTTCAAGCTTCTTTTATGAATTGGAAAATCCAGATGCTAAACTGTTGGGAAGTTTGCCCCATATGGAACACACAACATCTGGTGTTGATTATGGATTAGATTTCTTGAAAACAGAAGAACCAGGGAACTTTAATATTGGAGTGGAAGATACACCATTTCTTAATTTGGATTATGATATGAATCATGATATGAGTCATGATTCAAGAGGAATCTAA 1215 0.3959 MGAAYEQSGNVFLAPIETSRKRKTRSRGKGTRSVAETIAKWKEYNEHIYAAAGKDDAKQKRKAPAKGSKKGCMKGKGGPQNSECNYRGVRQRTWGKWVGEIREPNRGKRLWLGTFSTAQEAALAYDEAARAMYGPSARLNFPHVSDYSSIKESLKESTAASYSCSSVATTPATSEITTVSSHSDVFAVEDVKEIPKPVNMKNDNTVAVYREVYEASSPISRMKQEPKDEPADIIDPGGGEIQDGKSEGNQTQTLTHDVQIGEGVCNGQMDLSWIDDFDFNGDYLKSFSMDELFQVDELLGHIDNNPIDESGLVRSLDFGQMGFPEQSNPQVGTSSSFFYELENPDAKLLGSLPHMEHTTSGVDYGLDFLKTEEPGNFNIGVEDTPFLNLDYDMNHDMSHDSRGI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01737 404 MobiDBLite consensus disorder prediction 52 84 - -
Car02g01737 404 MobiDBLite consensus disorder prediction 1 35 - -
Car02g01737 404 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 16 376 - -
Car02g01737 404 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 376 - -
Car02g01737 404 CDD AP2 84 144 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 Gene3D AP2/ERF domain 85 144 IPR036955 GO:0003700|GO:0006355
Car02g01737 404 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Car02g01737 404 SUPERFAMILY DNA-binding domain 85 143 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01737 Car-Chr2 46471754 46474042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01737 16 390 AP2-EREBP Transcription Factor Family AT2G40340 38.583 2.47e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g01737 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01737 - K09286 mtr:MTR_5g083340 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01737 02 46471754 46474042 Car02g01737 02 46471754 46474042 ECH