Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01726 ATGGAAAGGCTAGTAGAAGTGTGCGAACCAGCAGAGGTTCGGATAGAATTTGAACTGAACTGCAAATGCCGAACCACAATACAGCTACGTTCTCTAAACCCAACCACACCAATGGCTTTCAAGATCCAAACCTCATCACCCAACAAATTCCTAGTCAACCCACCGAGTGGACTCATTCCCCCTCTCTCCTTAACCACTTTCCAAATCATCCTCAAACCACAACCCCATCTCCCTCGTTCCTACCCTCGTTCACCCTCCGACCGTTTTCTCATCAAAACCGCTGAGTTCGTTAACTCGTCCGGTTCAACTCACCCCGATTCAATCAACTCGTGGTTCGCCACTCGGCCTTATGGTTTTTCCACTTATGATGTTAAACTTAAAGTTGCTTTTATTGGTCCTCTCCTTCTATGCAACGCCGTTTCTCGAGGTGATTTTGAGTGTGTTAGGAGTTTGATTAAACGGCAGCGTTCGGTTTTATTGGATTTGAATTCGGTTGAGTCTGAGTCGATCCTACGAATTGCTACTGAGTTGGATAATCCGGATGATATGGTTCACCTTTTGCTTGAAGCTGGGTTGAGGATTCGTGAGACCGTTGGATCGGAGGATTTTAAGGGTTATGGTGATGTACACGTGGCGGATGGGAACATTGCTTGTGATGAACTACATGTGGAGGATATAGAGCAAGGAGAATTGGTGTTAGAGGCTTCAAGGCAAGGAAATGTGAGGGAACTCGAGTCACTATTGCGAAGAGGTGTGAATTTCAACTACCGTGATCATTATGGTTTAACACCACTTCATGTTGCTGCATTTAAAGGGCACAAGAATGTAGTGTTGATGCTTAGTGAGGCAGGATTGGACTTAGAATGTGAAGATGTTGAAGGTCATGTGCCCTTGCATATGGCAGTGGAGTGTGGTGATATTGAGACCGTTAGGTTATTTGTTGACAAGGGTGTGAACCTTAATGCTATGAATAAGAGGGGTGTCACACCTTTGTACATGGCTAAAGTTTGGGGATATGATGATATATCTCAGTTGCTTATTAGCAAAGGTGGGTTGTCTACCCTTTCTATGACTTTAGCTTAA 1083 0.4451 MERLVEVCEPAEVRIEFELNCKCRTTIQLRSLNPTTPMAFKIQTSSPNKFLVNPPSGLIPPLSLTTFQIILKPQPHLPRSYPRSPSDRFLIKTAEFVNSSGSTHPDSINSWFATRPYGFSTYDVKLKVAFIGPLLLCNAVSRGDFECVRSLIKRQRSVLLDLNSVESESILRIATELDNPDDMVHLLLEAGLRIRETVGSEDFKGYGDVHVADGNIACDELHVEDIEQGELVLEASRQGNVRELESLLRRGVNFNYRDHYGLTPLHVAAFKGHKNVVLMLSEAGLDLECEDVEGHVPLHMAVECGDIETVRLFVDKGVNLNAMNKRGVTPLYMAKVWGYDDISQLLISKGGLSTLSMTLA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01726 360 Pfam Ankyrin repeats (3 copies) 293 350 IPR002110 GO:0005515
Car02g01726 360 Pfam MSP (Major sperm protein) domain 18 99 IPR000535 -
Car02g01726 360 ProSiteProfiles Ankyrin repeat region circular profile. 260 291 - -
Car02g01726 360 Gene3D - 133 215 IPR036770 -
Car02g01726 360 PRINTS Ankyrin repeat signature 261 276 IPR002110 GO:0005515
Car02g01726 360 PRINTS Ankyrin repeat signature 309 323 IPR002110 GO:0005515
Car02g01726 360 Gene3D - 217 356 IPR036770 -
Car02g01726 360 SUPERFAMILY PapD-like 5 133 IPR008962 -
Car02g01726 360 ProSiteProfiles Ankyrin repeat profile. 293 325 IPR002110 GO:0005515
Car02g01726 360 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 129 IPR000535 -
Car02g01726 360 ProSiteProfiles Ankyrin repeat profile. 260 292 IPR002110 GO:0005515
Car02g01726 360 Pfam Ankyrin repeats (many copies) 235 280 IPR002110 GO:0005515
Car02g01726 360 SMART ANK_2a 260 289 IPR002110 GO:0005515
Car02g01726 360 SMART ANK_2a 293 322 IPR002110 GO:0005515
Car02g01726 360 SMART ANK_2a 326 357 IPR002110 GO:0005515
Car02g01726 360 SMART ANK_2a 131 160 IPR002110 GO:0005515
Car02g01726 360 SMART ANK_2a 166 196 IPR002110 GO:0005515
Car02g01726 360 Gene3D Immunoglobulins 1 132 IPR013783 -
Car02g01726 360 PANTHER SI:CH211-189E2.2 1 221 - -
Car02g01726 360 PANTHER SI:CH211-189E2.2 222 353 - -
Car02g01726 360 ProSiteProfiles Ankyrin repeat region circular profile. 293 325 - -
Car02g01726 360 PANTHER ANKYRIN-3-LIKE 222 353 - -
Car02g01726 360 PANTHER ANKYRIN-3-LIKE 1 221 - -
Car02g01726 360 SUPERFAMILY Ankyrin repeat 130 350 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01726 244 322 Ion Channels AT2G26650 43.038 5.18e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01726 - - aip:107608641 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01726 02 46371078 46373598 Car02g01726 02 46371078 46373598 ECH