Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01723 ATGACCAAGAACATGAATCTTTGTGGAACGTTGTGGTTTATTGTAGCAGTGTGGTTCTTGTTTCTTAACTTGAGTTTGTGTTGTTGTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTTAAGCAGAGAATAAGTGGTGACCCTTTTGGTGCTTTGTCAAATTGGTTTGACGATCAAGTTTCTGTTGACCCTTGTCATTGGTTTGGAGTTGAATGCTCAGATAGAAAAGTTGTAATCTTGAATTTGAAAGACCTTTGCCTTGAAGGAACTCTGGCACCAGAGCTAGTGAACCTTGTTCACATAAAGTCTATTATTTTAAGAAACAACTCTTTTTATGGGACCATACCTGAAGAAATTGTAACCTTACAAGAATTGGAGATTCTGGATTTGGGATACAACAATTTCAGTGGACATTTAGATGCTAATTTTGGACACAATATCTCACTAGCAATTCTTTTGCTGAACAACAATGAACTCCTTGTTGGTTTCTCTCCCAAAATCAATGAACTTAAGATGCTTTCTGAGTGTCAAGTTGATGAAAACCAGCTAATCAATGTAGATAAAATGCCAGCTTGTTCACAAAGATCCATGAAATGGCATGTTCATGAAAGTGAAGGTCCTAGGAGCCTGCTGGAATATCATAAACTACACCGTCATCGTCCTTATCATTACCGTCGCAATCGTACCTCGCCTCTCTATAGATCTCCTCCTTCCGATCCTCCATTGCCTGCAGCATTACCGCCGGTCACAAAGCCAGCTTCTCCTCCTAATGAAAATGTTCCAGATTCTCCAGATGAAAATGCTTATAACTCTCCTCCTCCTTTATCAACACTAGACTCAGAAGTACCAATTAAAAGCATGTCATCAAAGAAGAATCAAGTACCTATTTTTGCTGGAGTTATAGGTTGTGTAGTTTTTCTTGTTATTTCAACCATTGGTATATATCTTTGTAAAACCAACAAGGTTGCTATTGTTAGACCTTGGACTACTGGAATAAGTGGACAGCTTCAGAAGGCACTTGTGACAGGTGTGCCAAAGCTAAAGAGAACCGATCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCAATTCACCTATTGGTACATTGTACAAAGGAACTTTGTCTAGTGGAGTTGAAATTGCTGTAGCTTCTATTTCTGTAACATCATCTAAGAGTTGGACAAAGCCTTTAGAAGCTCAATTTAGAAAAAAGATAGACACATTGTCAAAAGTAAACCACAAGAATTTTGTCAATCTTATTGGTTATTGTGAAGAAGAAGAGCCTTTCACTAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGAACTGGGGAGCAAGGCTTAGAATTGCAATGGGAATGGCTTACTGCCTACAACATATGCATGAGTTAGACCCTCCAGTCGCCCTCATAAATCTAAGTTCTTCAACTGTCCACTTAACCGATGACCACGCCGCGAAAATATCCGATTTTAGTTTCTCCAACGAAACATCTTCATCCGAAAAAAAACACACTAACATGCCAATGCCATCAACAAGTCCTGCAAGTAATGTTTATAGCTTTGGTGTTTTGTTATTCGAGATAGTTACAGGTCGAATACCTTATACAGTCGATCATAGCTCACATGAAAACTGGGCATCACATTATCTAAAATGGGACAAACCTTTGAAGGAAATGGTGGATCCAATTCTAACATCTTATCAAGAAGATCAGGTGAAGGAAATTTCTGAACTGATTAGAGTTTGTGTCAATCCTGATTCGGAGAAGAGACCGACGATGAATGAAGTTAGTGAGAGATTGAGAGAGATAACAAAAATGTCACCTGAATTAGTAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAAATCAATCAATAA 1929 0.3826 MTKNMNLCGTLWFIVAVWFLFLNLSLCCCLNEEGNALLKFKQRISGDPFGALSNWFDDQVSVDPCHWFGVECSDRKVVILNLKDLCLEGTLAPELVNLVHIKSIILRNNSFYGTIPEEIVTLQELEILDLGYNNFSGHLDANFGHNISLAILLLNNNELLVGFSPKINELKMLSECQVDENQLINVDKMPACSQRSMKWHVHESEGPRSLLEYHKLHRHRPYHYRRNRTSPLYRSPPSDPPLPAALPPVTKPASPPNENVPDSPDENAYNSPPPLSTLDSEVPIKSMSSKKNQVPIFAGVIGCVVFLVISTIGIYLCKTNKVAIVRPWTTGISGQLQKALVTGVPKLKRTDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASISVTSSKSWTKPLEAQFRKKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLNWGARLRIAMGMAYCLQHMHELDPPVALINLSSSTVHLTDDHAAKISDFSFSNETSSSEKKHTNMPMPSTSPASNVYSFGVLLFEIVTGRIPYTVDHSSHENWASHYLKWDKPLKEMVDPILTSYQEDQVKEISELIRVCVNPDSEKRPTMNEVSERLREITKMSPELVVPKLSPLWWAELEINQ 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01723 642 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Car02g01723 642 ProSiteProfiles Protein kinase domain profile. 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01723 642 Pfam Protein tyrosine and serine/threonine kinase 360 615 IPR001245 GO:0004672|GO:0006468
Car02g01723 642 PANTHER LRR RECEPTOR-LIKE KINASE 2 641 - -
Car02g01723 642 Gene3D Transferase(Phosphotransferase) domain 1 440 626 - -
Car02g01723 642 MobiDBLite consensus disorder prediction 234 259 - -
Car02g01723 642 PANTHER PROTEIN MALE DISCOVERER 2 2 641 - -
Car02g01723 642 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Car02g01723 642 SUPERFAMILY L domain-like 27 187 - -
Car02g01723 642 MobiDBLite consensus disorder prediction 260 281 - -
Car02g01723 642 MobiDBLite consensus disorder prediction 225 281 - -
Car02g01723 642 Gene3D Phosphorylase Kinase; domain 1 331 439 - -
Car02g01723 642 SUPERFAMILY Protein kinase-like (PK-like) 342 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01723 Car-Chr2 46335403 46339860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01723 11 615 Receptor kinase-like Gene Family AT5G16000 24.379 3.31e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Car02g01723 PK_Tyr_Ser-Thr 6.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01723 - - lja:Lj2g3v2794510.1 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01723 02 46335403 46339860 Car02g01723 02 46335403 46339860 ECH
Car05g01491 05 59200005 59204064 Car02g01723 02 46335403 46339860 PCT