Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01720 ATGAACCAAAATAGCAATAGTGAGAAGCATAGATTTATGAAGATGAAGGGTTATGAACCAAGATCAAGTTCTTCATGTGCAGCTTGCAAATTTCTAAAAAGAAGATGCATACCAAATTGTATATTTGCACCTTATTTTCGATCCGACGAGTGCAAGAAATTTGCAAAAGTTCACAAAGTATTTGGAGCAAGCAATGTGAGCAAGATTCTTATTGAAGTGCCAGAGGAACAGAGAGAAGAAACTGTGAATTCTTTGGCTTTTGAAGCTGATGCAAGGCTTAGAGATCCTGTTTATGGATGCATTGGTGCTATAGCAATTTTGCAAAGGAAAATGTTTGAACTTCAACATGATCTTGCTATTGCTAAGGATCGTCTTGCTCATTACtctgctgctgcttcttcttctaattcttctttttcCAATGATTTCATCAATTCTCAAGTTTGCTTGCCACCTTTACCTGACTTTTTTACTTGCTCTGATTTTAATGATAACTTTAGCCAAACTTCTTCCTCTCAATCGTTTAGTCGAAACGATACTGTTGATGATTTCATTCAAATTCCATATATATTTTGA 576 0.3316 MNQNSNSEKHRFMKMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREETVNSLAFEADARLRDPVYGCIGAIAILQRKMFELQHDLAIAKDRLAHYSAAASSSNSSFSNDFINSQVCLPPLPDFFTCSDFNDNFSQTSSSQSFSRNDTVDDFIQIPYIF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01720 191 Pfam Lateral organ boundaries (LOB) domain 25 122 IPR004883 -
Car02g01720 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 15 184 - -
Car02g01720 191 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Car02g01720 191 Coils Coil 104 124 - -
Car02g01720 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01720 Car-Chr2 46311092 46311826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01720 15 141 AS2 family AT3G11090 71.654 6.68e-65 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g01720 LOB 7.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01720 - - gmx:100777635 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01720 02 46311092 46311826 Car02g01720 02 46311092 46311826 ECH