Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01719 ATGGACACATCTTCCACACCCCTTCCTCCTCCATCTCATCATCATGAATTTCACACTGTTCAAGAAACCAAACCCACCGCCGTTGTTACCACCACTCCAAGTGAaacatctaacaacagcagtagcagtaacaacagcaattctaataaacaacaacaacaacaTCGTAAATGCAAAGGTAAAGGTGGACCTGATAACAACAAATTTCGTTACCGTGGTGTAAGACAAAGAAGTTGGGGTAAATGGGTTGCTGAAATTCGTGAACCACGTAAAAGAACACGTAAATGGCTTGGTACTTTCTCTACTGCTGAAGATGCTGCTCGTGCTTATGATCGTGCTGCTCTTATTCTCTACGGTTCTAGAGCTCAACTCAATCTTCAACcttcttcttcttcttcccattcttcttctcataactcttcttcttcttcttcctcttcttctcgtaactcttcttcttcctccaacactcttcgtcctttacttcctcgtccttcttctttttctttctccaactcttctcatcttcctcttctcttcaactcttcttctaacgcttttcttcCTTACGCTGCGTACAGTTTTAATACTTTCCACCAACCCTTTATTCAAAATAGTAACACTAATTTACTTCAACATAGTGACAAACTGGTGCAACTGCAAcaacatcgggatcaagatcaggatcaagataaagaATCTGAACATGCATGTGGTTCTATTAGAACAACAACCTCGTACCAGAATAGGAGTGTTGAACAGGAACAACAACATGCAGGATACTATGATGTTTGTAATAATCAGGAAGAGGTGATTCAGAATCAGAATTGCAAAGTGGAGGGGGGAAATGTTTCTTCTAATCAAAGTAATATTGATGGAACAGTGGATCTGGATCAAATGGGTGGTGGTAATATTGGTTCTCCTTCTATGTGGCCATTGACAAGTGAAGAAGATTATACAACTACTTTGTGGGATTATAATGATCCTTTCTTCTTTGATTTTTGA 1005 0.2896 MDTSSTPLPPPSHHHEFHTVQETKPTAVVTTTPSETSNNSSSSNNSNSNKQQQQHRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAALILYGSRAQLNLQPSSSSSHSSSHNSSSSSSSSSRNSSSSSNTLRPLLPRPSSFSFSNSSHLPLLFNSSSNAFLPYAAYSFNTFHQPFIQNSNTNLLQHSDKLVQLQQHRDQDQDQDKESEHACGSIRTTTSYQNRSVEQEQQHAGYYDVCNNQEEVIQNQNCKVEGGNVSSNQSNIDGTVDLDQMGGGNIGSPSMWPLTSEEDYTTTLWDYNDPFFFDF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01719 334 MobiDBLite consensus disorder prediction 220 238 - -
Car02g01719 334 MobiDBLite consensus disorder prediction 220 250 - -
Car02g01719 334 MobiDBLite consensus disorder prediction 23 53 - -
Car02g01719 334 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 14 332 - -
Car02g01719 334 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Car02g01719 334 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Car02g01719 334 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Car02g01719 334 MobiDBLite consensus disorder prediction 126 159 - -
Car02g01719 334 MobiDBLite consensus disorder prediction 1 73 - -
Car02g01719 334 CDD AP2 70 127 IPR001471 GO:0003700|GO:0006355
Car02g01719 334 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Car02g01719 334 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Car02g01719 334 MobiDBLite consensus disorder prediction 58 72 - -
Car02g01719 334 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 14 332 - -
Car02g01719 334 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Car02g01719 334 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01719 Car-Chr2 46302996 46304340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01719 56 334 AP2-EREBP Transcription Factor Family AT2G40220 43.581 6.93e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g01719 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01719 K09286 - gmx:100301892 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01719 02 46302996 46304340 Car02g01719 02 46302996 46304340 ECH