Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g01718 | ATGTCGAATCAAAACAACCAGTCGAGCACTGCGACATTCGAATGGAACTTCGAAGACGACAAAACTCTCCAAATCCAAGGCCGAAAACTCTTATTCTTCGCCGTCGTTTTCACCATCATCGTCCTTTTCACAGCTCTATTCATGTGCTCCCGTTGGATCTTCCGAAACCGCAGCCTTCTCGGTTCAATCCCTACTCACCACGCGCCGTTCGTCACTTCTTCACCGTCGCAGGGACTCGATCCCGACGCGATTAAAAAACTTCCTATCATACTCTACCAAACTAATTGTTCCAATCGCGCGTTGGAGGAAACGGAATGTTGCATCTGTTTAAGCGCGTTTAGAGATGGAGATAAGTTGAAAGTGTTGCAGAAATGTGACCATTGTTTTCACTGTGAATGTGTTGATGCGTGGCTTGTGAATCATTCGAGTTGTCCTCTTTGTAGAGCTTCTCTTAAACTTGATTCATCTTTACCAATGATTTTGATTCAAGAACCACCTGTTAGATATAATCTCCCTCTTTGA | 522 | 0.4425 | MSNQNNQSSTATFEWNFEDDKTLQIQGRKLLFFAVVFTIIVLFTALFMCSRWIFRNRSLLGSIPTHHAPFVTSSPSQGLDPDAIKKLPIILYQTNCSNRALEETECCICLSAFRDGDKLKVLQKCDHCFHCECVDAWLVNHSSCPLCRASLKLDSSLPMILIQEPPVRYNLPL | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g01718 | 173 | SUPERFAMILY | RING/U-box | 94 | 154 | - | - | |
Car02g01718 | 173 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 153 | IPR013083 | - | |
Car02g01718 | 173 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
Car02g01718 | 173 | PANTHER | RING-H2 FINGER PROTEIN ATL66 | 9 | 163 | - | - | |
Car02g01718 | 173 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 9 | 163 | IPR044675 | - | |
Car02g01718 | 173 | Pfam | Ring finger domain | 105 | 148 | IPR001841 | - | |
Car02g01718 | 173 | SMART | ring_2 | 106 | 147 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car02g01718 | Car-Chr2 | 46285989 | 46286920 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car02g01718 | 16 | 156 | C3H Transcription Factor Family | AT3G11110 | 42.657 | 1.26e-30 | 107 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g01718 | - | - | gmx:100794554 | 184.496 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car05g01484 | 05 | 59120444 | 59121731 | Car02g01718 | 02 | 46285989 | 46286920 | PCT |