Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01708 ATGGCTGGAATCGAAGCTGTGTTTGAATTTCTTCGTAAAAATGGATTATCAGAAGCAGAGTCTGCTCTCAGACAAGACATCATTGAGAAGACTGATCTTGCTTCCTTTGACTATGAGAAATTCTTCTTTCCTATGGTTCCTCCGCCTCCTCCGGTTAAAATCCGGTCCTTTTCACGGCCACCGGAGTTTCCCGCCGGCGATGGAGAATTCTTTAAATCAAGCTCTGTTTCGTCGGAGGAACAGTTTGTTAGCATCGGTTCATCAAATTCTCGTGTTTCTTCTTTAGAATTCATCAATCCATACGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGAATCTTCTTCATCTGATAGATTATCTCAATTTGGCACGGCACGCGACTATCACGAATTCGATATGCAACATGAACCATATTGGTATAACCATGAAAAAGATGAAGAAGATGATGATTTTATGACACCTAGTTTTGAAGGGACAGATTATTTTGGGTGTCAAAGTGAAGATAAGTTTGTTATGACATCAAAAACAGAAATTCAATTAGAGAGAAATTGTGGTTACTTGGACATGTCATGTGTTTGTAATAATTCCTCTGTAGAGGATGGAAATGTGACTTATTCAAATTTGGAAAGCAAAGATCAATTCCATGGAAAACACGCGTTTGCACATAATTGTGAAGTTCCATTTTGCAAAAGTAGTCCAGTTTCAGGAGGTTCTTGTAGTGGTGATCCTATAAACTTTAGCTACCCTGATTTGAAGGAAATTGATCTGAATGATTTTCATCTGGAAGATATCAATTCTTTTGATTCTGCTGCGTTGCTTACCGTGAAGCAAAGTATTGATTGCTACACTAAAAATGATATTGGTGAGAAGTACAAGGATCCCTATGACTTAACTATGAACGTTGATGAAACAGATCTAGCGAATGGGATTGATGCCTATGGAGTAATAGACGATCGAGAGTTGAATGAAGAATTCCGAGATCCAGAGGTTACTGCAGATGGAGAGGATATTAATACTGATGATGAGCTCTTAAAATACATTCAAGAGGAGGAGTATGAAGTATTTGAACTGAGAATTGTACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAAGTGCCAATTGTGCTAAACACAGTCATGGCTGGTAGATACTATGTGACAGAATATCTTGGTTCGGCTGCCTTCAGTAGGGTTGTTCAAGCCCATGATCTTCATACAGGAATGGATGTTTGTTTGAAGATTATTAAAAATGACAAGGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTTTGAAATTTGTCAATAGGCATGATCCGGGAGATAAACACCACATACTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACCGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAATAGATTGCAGCTCATTACTCGGCAATGTTTGGAGGCATTGCAATACTTGCATAACTTGGGAATTGTTCATTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAAATGTGAGATAAAGATTATTGATCTTGGAAGCAGTTGCTTTCAAACAGACAATTTGTGCCTATATGTACAATCTCGATCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGACATATGGTCACTCGGCTGTATTCTGGCTGAGCTATGCTCTGGCGAAGTGCTCTTTCCAAATGATGCGGTCGTGATGATTCTCGCACGTATGATTGGAATGTTTGGTCCTATTGATATGGAGATGTTGGTGAAAGGGCAAGAAACACACAAGTACTTCACCAAAGAATATGATATTTACTTCGTAAATGAGGAGACTGATCAGCTGGAGTACATAATTCCAGAAGAGTCGTCATTGGAGCAGCACCTACAGATCAGCAATACTATGTTTATTGATTTTGTCAGATACTTGCTTAGAATCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGTTTACTAG 2085 0.3856 MAGIEAVFEFLRKNGLSEAESALRQDIIEKTDLASFDYEKFFFPMVPPPPPVKIRSFSRPPEFPAGDGEFFKSSSVSSEEQFVSIGSSNSRVSSLEFINPYGIRSSSQTQNDSESSSSDRLSQFGTARDYHEFDMQHEPYWYNHEKDEEDDDFMTPSFEGTDYFGCQSEDKFVMTSKTEIQLERNCGYLDMSCVCNNSSVEDGNVTYSNLESKDQFHGKHAFAHNCEVPFCKSSPVSGGSCSGDPINFSYPDLKEIDLNDFHLEDINSFDSAALLTVKQSIDCYTKNDIGEKYKDPYDLTMNVDETDLANGIDAYGVIDDRELNEEFRDPEVTADGEDINTDDELLKYIQEEEYEVFELRIVHRKNRTGFEENKEVPIVLNTVMAGRYYVTEYLGSAAFSRVVQAHDLHTGMDVCLKIIKNDKDFFDQSLDEIKLLKFVNRHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKKCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPIDMEMLVKGQETHKYFTKEYDIYFVNEETDQLEYIIPEESSLEQHLQISNTMFIDFVRYLLRINPKRRPTARQALKHPWLSYVY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01708 694 Pfam Protein kinase domain 390 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01708 694 CDD PKc_DYRK_like 388 690 - -
Car02g01708 694 SMART serkin_6 388 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01708 694 ProSiteProfiles Protein kinase domain profile. 388 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01708 694 PANTHER DUAL SPECIFICITY PROTEIN KINASE 6 694 - -
Car02g01708 694 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 6 694 - -
Car02g01708 694 Gene3D Phosphorylase Kinase; domain 1 383 469 - -
Car02g01708 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Car02g01708 694 SUPERFAMILY Protein kinase-like (PK-like) 377 691 IPR011009 -
Car02g01708 694 Gene3D Transferase(Phosphotransferase) domain 1 442 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01708 Car-Chr2 46105354 46110588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01708 385 685 MAP Kinase Gene Family AT5G19010 31.153 1.24e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Car02g01708 Pkinase 6.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01708 - - gmx:100783988 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01708 02 46105354 46110588 Car02g01708 02 46105354 46110588 ECH