Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01679 ATGGATGTGATAAAGACGCAACAAATATCATGGAGAGCGATTGAGAAAGTTGTTGTTCACCCTTTAGTTTTGCTTAGCATAGTTGATAATTACAACAGAGTCGCCAAAGATACTCGCAAACGTGTCGTCGGTGTCTTGCTAGGTTCATCTTTCAAAGGCACCGTTGATGTTACCAACAGCTACGCCGTGCCATTTGAAGAAGACGAAAAGGATCCTACTATTTGGTTTCTTGATCACAATTACCATGAATCAATGTTCTCCATGTTTAAGAGAATCAATGCTAAGGAGCATGTTGTGGGATGGTATAGCACTGGACCAAAACTGCGGGAAAATGACCTTGACATTCATGGTTTATTCAATGACTATGTTCCAAATCCTGTTTTGGTTATAATTGATGTCGAACCTAAGGAGTTGGGAATTCCTACAAAAGCTTATTATGCTGTTGAAGAAGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTTCATGTGCAATCTGAAATTGCTGCTCATGAAGTTGAGGAAATAGGAGTGGAACACTTGCTCAGAGATGTGAAGGATACAACCATTAGCACTCTTGCAACAGAGGTAAGTGCAAAACTCACGGCCTTGAAAGGTTTGGATGCAAGACTCAAAGAAATAAGAAGTTACCTTGACCTTGTCATTGATGGAAAGCTTCCTCTAAACCATGAGATCCTCTACCATTTGCAGGACGTATTCAACCTGCTGCCAAATCTTAATGTCACTGATTTGATCAAGGCTTTTGCAGTGAAAACAAATGATATGATGCTAGTAATATACCTATCGTCTCTCATTAGAAGTGTAATTGCTCTCCACAACTTGATTAACAACAAGATGCTCAACAAAGAACATGAAAGGGAAGAAGACTCAAAATCAGTGCCTGTACCAAGTGTACCAAGCACAGCAGGAAATTGA 942 0.3981 MDVIKTQQISWRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNSYAVPFEEDEKDPTIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVTDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEREEDSKSVPVPSVPSTAGN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01679 313 MobiDBLite consensus disorder prediction 291 313 - -
Car02g01679 313 Gene3D Cytidine Deaminase, domain 2 10 194 - -
Car02g01679 313 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 307 - -
Car02g01679 313 CDD MPN_RPN7_8 15 295 IPR033858 GO:0005838
Car02g01679 313 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car02g01679 313 ProSiteProfiles MPN domain profile. 17 154 IPR037518 -
Car02g01679 313 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 307 - -
Car02g01679 313 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car02g01679 313 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01679 Car-Chr2 45759004 45762248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01679 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 29.060 1.37e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01679 K03038 - gmx:100790393 578.17