Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01677 ATGCCTTCTTCTGCTCCAACTTTGCTCTCAAAATGTACAATTTTCCCAAACACAAAATCAACTATTGGAAACCTTAAACTCTCTGTTTCAGACCTTCCTATGCTTTCTTGTCACTACATCCAAAAAGGTTGTCTCTTCACTCAACCTTCTATTCCTTTCCATAATTTAATCCGTAACTTAAAATCCGCTCTCGCTCGCACTCTCTCTCTTTTTCCACCACTCGCCGGCCGTTTAACCACCGATTCCGACGGTTACGTTTACTTAACCTGCAACGACGCCGGTGTCGATTTCATCCATGCCACTGCCACCGGATTCTATATCCGTGATCTCTTATCAACCACCGACGTTCATGAATCGTTCAAAGAATTCTTCGCTTTTGACAGAAAAGTTAGTTACACTGGTCACTTCTCTCCGATTTTGGCTGTTCAGGTAACTGAGCTCGCTGACGGCGTTTTCATCGGCTGCGCCGTTAATCACGCCGTCACTGACGGAACTTCCTTCTGGAATTTCTTCAATACATTCGCGCAAGAATGCAGAGGAGCGAACAAATGTCTCCGGAATGTTCCAAATTTCCGCCGTGACTCTGTTTTAATCTCCGACGCCGTTCTACGTTTGGAGAAAGGAGGTCCGGTGGTTACGTTCAACGCCGACGCGCCGTTTCGTGAGAGAATCTTTAGCTTCAGTCGCGAAGCGATTCAGAAACTGAAAGCTAAAGTTAATAACCGACGGTGGACGGAAAATAACAGCACCGTCGAGTTGATGCAGAAGCATATCAACGACCGTTATAACAATAACAATAACAACCAGAAAGAAAATGGGAAGGTAGCGACGTTAATTGATAACTGGTTCAAAAGCAATGTTCATTCTAAACAGCAAACGATTTCTGTTACAGAAACCGAAACGAATGAGATTTCGTCGTTTCAATCGTTATGCGCGTTGCTATGGCGTGCGGTGACACGCGCGAGGAAATTTCCCGCTTCGAAAACGACAACGTTTAGAATGGCTGTTAATTGCCGTCACAGAATAGAACCGAAAATGGAAACGTATTATTTCGGAAACGCGATTCAGAGTGTGCCTACTTATGCTTCAGCAGGGGATGTAATGTCCAGGGATTTACGGTGGTGTGCGGAGCAGTTGAATAAAAACGTGAAGGCGCATGATAACGGTATGGTGAGGTTGTTCGTAGAGGATTGGGAAAAGAATCCTAGGTGTTTTCCTTTGGGGAATCCTGATGGTGGTTCTATAACTATGGGTAGTTCTCCTCGGTTTCCAATGTATGATAACGATTTTGGTTGGGGGAAGCCATTGGCTGTTAGGAGTGGAAAGGCGAATAAATTTGACGGTAAGATTTCGGCGTTTCCTGGTAGAGATGGAACTGGGACCGTTGATTTGGAGGTTGTTTTGGCGCCTGAAACTATGGCAGGCCTTGAAGCTGATCCAGAGTTTATGCTATACGCTTCGAGGCAGTTATGA 1473 0.4515 MPSSAPTLLSKCTIFPNTKSTIGNLKLSVSDLPMLSCHYIQKGCLFTQPSIPFHNLIRNLKSALARTLSLFPPLAGRLTTDSDGYVYLTCNDAGVDFIHATATGFYIRDLLSTTDVHESFKEFFAFDRKVSYTGHFSPILAVQVTELADGVFIGCAVNHAVTDGTSFWNFFNTFAQECRGANKCLRNVPNFRRDSVLISDAVLRLEKGGPVVTFNADAPFRERIFSFSREAIQKLKAKVNNRRWTENNSTVELMQKHINDRYNNNNNNQKENGKVATLIDNWFKSNVHSKQQTISVTETETNEISSFQSLCALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKMETYYFGNAIQSVPTYASAGDVMSRDLRWCAEQLNKNVKAHDNGMVRLFVEDWEKNPRCFPLGNPDGGSITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGTGTVDLEVVLAPETMAGLEADPEFMLYASRQL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01677 490 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 484 - -
Car02g01677 490 Gene3D - 7 204 IPR023213 -
Car02g01677 490 SUPERFAMILY CoA-dependent acyltransferases 35 180 - -
Car02g01677 490 Pfam Transferase family 8 483 - -
Car02g01677 490 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 484 - -
Car02g01677 490 Gene3D - 220 481 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01677 Car-Chr2 45746001 45747858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01677 60 477 Monolignol Biosynthesis Gene Families AT5G48930 25.000 1.25e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01677 - - vun:114195488 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01677 02 45746001 45747858 Car02g01677 02 45746001 45747858 ECH
Car02g01677 02 45746001 45747858 Car06g00122 06 1515190 1516590 PCT