Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01676 ATGTCTGACGCGTTGATTAATGGATTGGCTGGAGCTGGAGGAGGGATCATTGCTCAACTTATCACATACCCTCTTCAAACTGTAAACACTCGTCAACAAACAGATCGTGATCCGAAGAAGGACAAAAAGAATCTAGGAGCTTTTCAGCAAATGTGTCAGGTTGTGAAACAAGAGGGGTGGGAGCGATTGTATGGAGGCTTGACACCATCACTTGTTGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAGAGCTGAAGAAGCTGCATTAGAGAAGAAAATGCTAGGCCATGGTGATGGCTCCGTTGGGATGATCTCCTCGCTTATTGTTGCTGCTTTATCTGGCTGTGTTAATGTGCTCTTGACGAATCCTATATGGCTAGTTGTTACGCGCATGCAGACACATAGAAAAGAGTCGAAGAGAAGTCTCTCTGATTGGCGGTTGCCAGACACCACTGAACAAAAGATGCTTTCTACCTTTGAGCCTCTTGCTTATGGAACTAGCAATGTGATTCAAGAAGTTTATAATGAATCTGGAGTTTTGGGTTTCTGGAAGGGTGTGTTGCCGACATTGGTCATGGTTAGCAATCCTTCCATACAGTTCATGTTGTACGAAACCTTGTTAGCAAAGTTGAAAAAAGAACATGCTAGCAATGGAGTATCTGCTTTGGAGGTATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCAACAGTTGTAACCTATCCTCTTCTTGTTGTGAAGGCAAGGCTTCAAGCTAGACAGGTTAAAAATGGAGACAAGAGACACAATTATGAAGGTACATGGGATGCTATTATTAAGATGATCCGATATGAAGGGCTTAATGGATTTTACAAAGGCATGGGAACCAAAATTGTACAAAGTGTTCTAGCTGCAGCCGTTTTGTTCATGGTGAAGGAAGAACTTGTTAAGCAGACTCGTTTCTTGCTTACAAAGCCAAAGCCTCTTTGA 990 0.4232 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKDKKNLGAFQQMCQVVKQEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEEAALEKKMLGHGDGSVGMISSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESKRSLSDWRLPDTTEQKMLSTFEPLAYGTSNVIQEVYNESGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKEHASNGVSALEVFLLGALAKLGATVVTYPLLVVKARLQARQVKNGDKRHNYEGTWDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVLFMVKEELVKQTRFLLTKPKPL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01676 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Car02g01676 329 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Car02g01676 329 Pfam Mitochondrial carrier protein 228 316 IPR018108 -
Car02g01676 329 Pfam Mitochondrial carrier protein 109 221 IPR018108 -
Car02g01676 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 318 IPR018108 -
Car02g01676 329 SUPERFAMILY Mitochondrial carrier 3 314 IPR023395 -
Car02g01676 329 Gene3D Mitochondrial carrier domain 98 320 IPR023395 -
Car02g01676 329 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 325 IPR044712 GO:0006862|GO:0055085
Car02g01676 329 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 325 - -
Car02g01676 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01676 Car-Chr2 45725670 45731457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01676 24 317 Chloroplast and Mitochondria Gene Families AT1G25380 27.575 7.65e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01676 K13354 - gmx:100775784 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01676 02 45725670 45731457 Car02g01676 02 45725670 45731457 ECH