Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01645 ATGAGATCCTTGAAGACATCCCGTTTTACTAGCTCATCACGATGCTTTTTTCAACAGTTTTTTGTTTCATGTGTTTCCATCTTACTCATAGTGGTCAGCACTGGTGGCTATAAAAAGGTGATTGCATCTCGTCACCTTGTTGAAGTGAATCACCAAGGTTATCCTACATGGTTTCCTACTGACGACCGTATCTTGTTGTTTGAGCTCCGAAAAGGTCTAGCTCGACCAAACACCATTGTGGCCAAGGATGGTAGTGGCCAATATAAAACGGTTACAGCTGCTATTAATTCGTATCCTAAGAATCATCGAGGAAGATATGTTATATATGTTAAAATGGGTGTCTACCATGAGTATATAACTATTGATGCTGAAAAAAGAAAAATTTTATTATACGGTGATGGCCTTACAAACACAATTATCACTGGAAACAAGAACCGTCAGAGTGGACTCGGTACAAACGAAACAGCCACATTTTCCACCTTGGGTGATGACTTCATTGCCATCACTTGGTTGCCTTTCACTAGCGTGCCATACAATAAAGAATTGTAG 549 0.3989 MRSLKTSRFTSSSRCFFQQFFVSCVSILLIVVSTGGYKKVIASRHLVEVNHQGYPTWFPTDDRILLFELRKGLARPNTIVAKDGSGQYKTVTAAINSYPKNHRGRYVIYVKMGVYHEYITIDAEKRKILLYGDGLTNTIITGNKNRQSGLGTNETATFSTLGDDFIAITWLPFTSVPYNKEL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01645 182 Gene3D - 75 171 IPR012334 -
Car02g01645 182 PANTHER PECTINESTERASE 44 168 - -
Car02g01645 182 PANTHER PECTINESTERASE 44 168 - -
Car02g01645 182 Pfam Pectinesterase 77 167 IPR000070 GO:0030599|GO:0042545
Car02g01645 182 SUPERFAMILY Pectin lyase-like 75 168 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01645 Car-Chr2 45105304 45106728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01645 41 167 Carbohydrate Esterase AT2G26450 40.945 3.84e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01645 K01051 - gmx:100820142 162.54