Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01640 ATGAGAACCTTGAACACATCATGTTTTGCTAGCTCGTCACGAAGTTTGTTTCAACAGATTTTAGTTTCATATGTTTCTGTCTTACTCATAATGGTTAACATTGATGGCTATAAAAAGGTGCTTGCATCTCGTCGTCTTGTTGAAGTGGATCACCAAGGTTATCCTACATGGTTTTCTACTGATGACCGTATCTTGTTGTCTGAGCTCCAAAAAGGAGTAGCTCGGCCCAACACCATTGTGGCCAAGGATGGTAGTGGCCAATATAAAACGATTACAACCGCTATTAACTCGTACCCTAAGAATCATCAAGGAAGATATGTTATATATGTTAAAATGGGTGTCTACTATGAGTATATTACTATCGACCCTAAAAAAATTAAAATTTTATTATACGGTGATGACCCTACAAACACAATTATCACTGGAAACAAGAGCGTTCAGAATGGACTCAAAACAGACAAAACAGCCACATTTTCCACCTTTGGTAAAGATTTTATTGCCATGTCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGCAGTAGCGCTTCTTGTTGAAGATGAGTTTGGTACTACCTTGATTCAGAACTCTAAGATCTTGGTGAGGAAGCCCATTCAAGGACAACAAAACGTTGTGGTGGCAGATGGCTCATCTCACAAGGACACACACACTGGAATAGTTCTTCAAAACTGTTCCATTATGCCACACATTGAGCTATATCCTTATCAGCTTACAGTGAAGACTTACTTGGCAAGGCCATGGAAGGATTTTTCAAGGGCGGTCTTCATTAACAATTATTTTGATGAATTTATTCAAAGAGATGGATATATGATATGGAATATTAATGAAACAAACACTAAAAACTTGTACTTTGTTGAGTTTGGCAATATTGGACCCGATGCCAATGCTACAACAAGAGTTAAATGGGCAAAAGGTGTCATTACAAAAGATGAAGCTGTTAGATTTACTGTTGAACCATGGCTTAATGCTAGCACTTGGTTGCCTTTCAATGAAGCAAACCTCTTACGCGCCAAGATCTCGTGCTTCTACACGCGCCAAGATAGGTTCGTCCCTCACAAGGATCTCACGCTACCGCCACTCCGTAATTCTTACGCGCCGGTTAAATTGGGTAGCGGAGAGTTCTGCGTTGTTTATCGTGGCAACGACGACGCTTTGTCTTTGGGTGAATCGCAGCGTTTAGGGTATGTTCCTGTGGTGGTTACGGAGGGACCGTTGAACAACATGCCGTTTGTGGATGTGCTGAGGTGGAGGAAGATGGCTGTGTTTGTGAAGAGTTATGTGAAGGTTGATACTGACACGTGGAGGGAACAGCATGAGTTTATGAAAAGATTGGGTTTGGTGGCGAGTAAGCACTTACAGTGGAATCGCAGTTCTATACCGTTGGATGCGTTTAACACTATCATGTATCACTTGTGGGTTAGACGCCATACCGTTAGATATGAAAGAGAATCTCTGATCATGTATACTTAG 1500 0.4113 MRTLNTSCFASSSRSLFQQILVSYVSVLLIMVNIDGYKKVLASRRLVEVDHQGYPTWFSTDDRILLSELQKGVARPNTIVAKDGSGQYKTITTAINSYPKNHQGRYVIYVKMGVYYEYITIDPKKIKILLYGDDPTNTIITGNKSVQNGLKTDKTATFSTFGKDFIAMSIAFENKAGPKAQQAVALLVEDEFGTTLIQNSKILVRKPIQGQQNVVVADGSSHKDTHTGIVLQNCSIMPHIELYPYQLTVKTYLARPWKDFSRAVFINNYFDEFIQRDGYMIWNINETNTKNLYFVEFGNIGPDANATTRVKWAKGVITKDEAVRFTVEPWLNASTWLPFNEANLLRAKISCFYTRQDRFVPHKDLTLPPLRNSYAPVKLGSGEFCVVYRGNDDALSLGESQRLGYVPVVVTEGPLNNMPFVDVLRWRKMAVFVKSYVKVDTDTWREQHEFMKRLGLVASKHLQWNRSSIPLDAFNTIMYHLWVRRHTVRYERESLIMYT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01640 499 Gene3D - 192 345 IPR012334 -
Car02g01640 499 PANTHER PECTINESTERASE 46 189 - -
Car02g01640 499 PANTHER PECTINESTERASE 192 340 - -
Car02g01640 499 PANTHER PECTINESTERASE 192 340 - -
Car02g01640 499 SUPERFAMILY Pectin lyase-like 74 339 IPR011050 -
Car02g01640 499 PANTHER PECTINESTERASE 46 189 - -
Car02g01640 499 Pfam Pectinesterase 78 191 IPR000070 GO:0030599|GO:0042545
Car02g01640 499 Pfam Pectinesterase 194 332 IPR000070 GO:0030599|GO:0042545
Car02g01640 499 Gene3D - 75 191 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01640 Car-Chr2 44879832 44882543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01640 55 337 Carbohydrate Esterase AT2G26450 36.223 3.92e-64 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01640 K01051 - gmx:100808559 358.607