Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01638 ATGTCAATGGCATTTGAGAATATAGCTGGTCCAAAAGCTCAACAAACAATAGCACTTCATGTTGAAGGTGATCGCTCAGTATTCTTCCGGTGTGCAATTCTTGGTTATCAAGACACATTGTACACAAACAAAAGTTATCAATTCTACCATAACTGTGAGATTTATGGAACCATTGACTTTATCTTCGGTAAGTCGGGTACTACCTTGATCCATAACTCTAAGATCTTGGTAAGGAAGCTCATTCAAGGACAACAAAATATTATGGTGGCAAATGGATCATACAACAAGGACAAGCACACGGGAATAGTTCTCCAAAACTGCTCCATCATGCCAGACATTGATCTATATCCTTATCGATTTACAGCGAAGACTTACTTGGCAAGGCCATGGGAGGCTTTTTTAAGGGCGGTCTTCATTAACAATTATTTTTGA 432 0.3889 MSMAFENIAGPKAQQTIALHVEGDRSVFFRCAILGYQDTLYTNKSYQFYHNCEIYGTIDFIFGKSGTTLIHNSKILVRKLIQGQQNIMVANGSYNKDKHTGIVLQNCSIMPDIDLYPYRFTAKTYLARPWEAFLRAVFINNYF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01638 143 Pfam Pectinesterase 2 142 IPR000070 GO:0030599|GO:0042545
Car02g01638 143 SUPERFAMILY Pectin lyase-like 3 143 IPR011050 -
Car02g01638 143 PANTHER PECTINESTERASE 2 142 - -
Car02g01638 143 ProSitePatterns Pectinesterase signature 2. 54 63 IPR033131 -
Car02g01638 143 Gene3D - 1 143 IPR012334 -
Car02g01638 143 PANTHER PECTINESTERASE 2 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01638 Car-Chr2 44841720 44842151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01638 3 140 Carbohydrate Esterase AT2G47030 51.079 6.33e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01638 K01051 - gmx:100775225 181.415