Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01637 ATGAGAACCTTGGACACATCATGTTTTGCTAGCTCGTCACGAAGCTTGTTTCAACAGATTTTAGTTTCATATGTTTTCGTCTTACTCATAGTGGTTAACACTGGTGGCTATAAAAAGGTGCTTGCATCTCGTCATCTTGTTGAAGTGGATCACCAAGGTTATCCTACATGGTTTTCTACTGATGACCGTATCTTGTTGTCTGAGCTCCAAAAAGGAATAGCTCGACCCAACACCATTGTGGCCAAGGATGGTAGTGGCCAATATAAAACGATTACAGCCGCTATTAACTCGTACCCTGAGAATCATCAAGGAAGATATGTTATATATGTTAAAATGGGTGTCTACCATGAATATATTACTATTGATCCTAAAAAAATTAAAATTTTATTATACGGTGATGGCCCTACAAACACAATTATCACTGGAAACAAGAGTGTTCAGAATGGACTCAAAACAGACGAAACAGCCACATTTTCCACCTTTGGTGAAGACTTTATTGCCATGTCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGCAGTAGCACTTCTTGTTGAAGGTGATCAGTCAGTATTCTTCCGGTGTGCATTTCTTGGTTATCAAGATACATTGTACGCAAACAGGGGTCGTCAATTCTACCGTAACTGTGAGATTTATGGGACCATTGATTTTATCTTTGGTGAGTTTGGTACTACCTTGATTCAAAACTCTAAGATCTTGGTGAGGAAGCCCATTCAAGGACAACAAAACGTTGTGGTGGCAGATGGCTCATCCCTCAAGGGCACACACACTGGAATAGTTCTTCAAAACTACTCCATTATGCCACACATTGAGCTATATCCTTATCGGCTTACGGTGAAGACTTACTTAGCAAGGTCATGGAAAGCTTTTTCAAGGGCGGTCTTCATTAACAATTATTTTGATGAATTAATTCAAAGAGATGGATATATGATATGGAATGTTAATGAAACAAACACTAAAAACTCGTACTTTGCTGAGTTTGGCAATATTGGACCCGGTGCCAATGCTTCAGCAAGAGTTAAATGGGCAAAAGGTGTCATTACCAAAGATGAAGTTGTTAGATTCACGGCTGAACCATGGCTTAATGCTAGCAGTTGGTTGTCTTTCACTGAAGCAAACCTCTTACGCGCCAAGATCTTGTGCTTCCCCACGCGCCAAGATAGGTTCGTCCCTCACAAGGATCTCACGCTACCGCCACTCCGTAATTCTTACGCGCCGGTTAAATTGGGTAGCGGAGAGTTCTGCGTTGTTTATTGTGGCAACGACGACGTTTTGTCTTTGGGTGAAGCGCTGCGTTTAGGGTGTGTTCCTGTGGTGGTTACGGAGGGACCGTTGAACAGCATGCCGTTTGTGGATGTGCTGAGGTGGAGGAAGATGGCTCTGTTTGTGAAGAGTTATGTGAAGGTTGATACTGACACGTGGAGGGAACAGCATGAGTTTATGAAAAGATTGGGTTTGGTGGCGAGTAAGCACTTACAGTGGAATCTCAGTCCTATACCGTTCGATGCGTTTAACACTATCATGTATCACTTGTGGATTAGACGCCATACCGTTAGATATGAAAGTGAATCTCTGATCATGTATACTTAG 1620 0.4198 MRTLDTSCFASSSRSLFQQILVSYVFVLLIVVNTGGYKKVLASRHLVEVDHQGYPTWFSTDDRILLSELQKGIARPNTIVAKDGSGQYKTITAAINSYPENHQGRYVIYVKMGVYHEYITIDPKKIKILLYGDGPTNTIITGNKSVQNGLKTDETATFSTFGEDFIAMSIAFENKAGPKAQQAVALLVEGDQSVFFRCAFLGYQDTLYANRGRQFYRNCEIYGTIDFIFGEFGTTLIQNSKILVRKPIQGQQNVVVADGSSLKGTHTGIVLQNYSIMPHIELYPYRLTVKTYLARSWKAFSRAVFINNYFDELIQRDGYMIWNVNETNTKNSYFAEFGNIGPGANASARVKWAKGVITKDEVVRFTAEPWLNASSWLSFTEANLLRAKILCFPTRQDRFVPHKDLTLPPLRNSYAPVKLGSGEFCVVYCGNDDVLSLGEALRLGCVPVVVTEGPLNSMPFVDVLRWRKMALFVKSYVKVDTDTWREQHEFMKRLGLVASKHLQWNLSPIPFDAFNTIMYHLWIRRHTVRYESESLIMYT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01637 539 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Car02g01637 539 Gene3D - 73 386 IPR012334 -
Car02g01637 539 SUPERFAMILY Pectin lyase-like 75 380 IPR011050 -
Car02g01637 539 Pfam Pectinesterase 78 372 IPR000070 GO:0030599|GO:0042545
Car02g01637 539 PANTHER PECTINESTERASE 47 382 - -
Car02g01637 539 PANTHER PECTINESTERASE 47 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01637 Car-Chr2 44770773 44773402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01637 42 384 Carbohydrate Esterase AT2G47030 46.197 2.78e-95 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01637 K01051 - gmx:100808559 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01637 02 44770773 44773402 Car02g01637 02 44770773 44773402 ECH