Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01636 ATGATCCTTGAACACATCGTACTCATAGTGGTCAGCACTGGTGGCTATAAAAAGGTGTTTGCATCTCGTCGCCTTGTTGAAGTGGATCACGAAGGTTATCCTACATGGTTTTCTATTGATGATAGTATCTTGTTGTCTGAGCTCCAAAAAGGTCTAGGTCAATCCAACACCATTGTGGCCAAGGATGGAAGTGGCCAATATAAAAAGGTCTACCACTTTGGTAAAGACTTCATTGCCATGTCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGTAGTTGCACTTCGTGTTGAAGACATTGAGCTATATTCTTTTAGAATGAAGATTTACAATGCAAGGCCATATAACACTTTTTCAAGGGAGGTCTTCATTAACAATTATTTTGATGATTTTATTCAACGAGATGAATATATGATATGGAAAATTAATGAAACAAACACTGAAAAGTCTTACTTCGTTGAGTTTGAAAACATTGGATTTGGTGTCAATGCTATAGCAAGAATTAAATGGGCAAAATGTGTCATTATCAAATATGAAGCTGTTAGATTCATTGCTGAACCATGGGTTAATGAAAGCACTTGGCTGCCTTTCAATGGCGTGCCATACAATATAGAATTACAGGCTTATGATATTTTCTTTGTTTCATTTCAACTACAATACTTTGTATTTTAA 681 0.3568 MILEHIVLIVVSTGGYKKVFASRRLVEVDHEGYPTWFSIDDSILLSELQKGLGQSNTIVAKDGSGQYKKVYHFGKDFIAMSIAFENKAGPKAQQVVALRVEDIELYSFRMKIYNARPYNTFSREVFINNYFDDFIQRDEYMIWKINETNTEKSYFVEFENIGFGVNAIARIKWAKCVIIKYEAVRFIAEPWVNESTWLPFNGVPYNIELQAYDIFFVSFQLQYFVF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01636 226 Pfam Pectinesterase 107 192 IPR000070 GO:0030599|GO:0042545
Car02g01636 226 PANTHER PECTINESTERASE 73 101 - -
Car02g01636 226 PANTHER PECTINESTERASE 108 209 - -
Car02g01636 226 Gene3D - 102 211 IPR012334 -
Car02g01636 226 PANTHER PECTINESTERASE 73 101 - -
Car02g01636 226 PANTHER PECTINESTERASE 108 209 - -
Car02g01636 226 SUPERFAMILY Pectin lyase-like 56 206 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01636 Car-Chr2 44740452 44741955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01636 110 206 Carbohydrate Esterase AT5G04960 29.293 1.57e-11 61.2