Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01633 ATGAAACAAACACTGAAAACTCTTACTTTGTTGAGTTTGACAACATTGAATCCGGTGCCAATGCTACAACAAGAGTTAAATGGACAAAAGGTGTCATTACCAAAGATGAAGTTGCCAGATTCACTGCTGAACCGTGGCTTAATGCCAAAAGTTGATTGGCTTTCACTGTTTGGTACTACCTTGATCCAAAGCTCCAAAATATTGGTAAGGAAACCCATTCAAGGACAAGAAAATGTTGTGGTGGGAGATGGCTCATCCCACCAAAACATGCACACTAGAATAGTTCTCCAAAATTGTTCCATTATGCCAGACATTGAGTTATATCCTTATCGATTTACGGTGGAGACTTACTTGGCAATGCCATGGAAGGCTTTTTCAAGGGCGGTTTTCATTAACAATTATTTTGATGATTTTATTCAACGAGATGGATATATGATCTTGAAATTTAAGGAAACAAACAATGAAAACTCTTACTTTGCTGAGTTTGACAACATTGAACCCGGTGCCAATGCTACATCAAGAGTTAAATGGGCAAAAGATGTCATTACCAAAGATGAAGCTGTCAGATTCACTGCTGAACTGTGGCTTATTGCTAGCAGTTGGTTGGCTTTCATTGGGGTGCCATACAATATTGGATTATAG 642 0.3863 MKQTLKTLTLLSLTTLNPVPMLQQELNGQKVSLPKMKLPDSLLNRGLMPKVDWLSLFGTTLIQSSKILVRKPIQGQENVVVGDGSSHQNMHTRIVLQNCSIMPDIELYPYRFTVETYLAMPWKAFSRAVFINNYFDDFIQRDGYMILKFKETNNENSYFAEFDNIEPGANATSRVKWAKDVITKDEAVRFTAELWLIASSWLAFIGVPYNIGL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01633 213 PANTHER PECTINESTERASE 51 212 - -
Car02g01633 213 SUPERFAMILY Pectin lyase-like 51 212 IPR011050 -
Car02g01633 213 PANTHER PECTINESTERASE 51 212 - -
Car02g01633 213 Pfam Pectinesterase 51 195 IPR000070 GO:0030599|GO:0042545
Car02g01633 213 Gene3D - 48 213 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01633 Car-Chr2 44674108 44676471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01633 51 213 Carbohydrate Esterase AT2G47030 40.854 1.89e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01633 K01051 - gmx:100808559 175.252