Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01629 ATGAGCGCACAAGGTCAAGGACAAGTTCAAGTGATTGATGAAGCGGTGCTGGATGACATAATCCGGCGACTCACGGAGGTCCGATTAGCCCGACCCGGAAAACAAGTTCAGCTCTCTGAAGCTGAGATCAAGCAATTATGTTTAGCTTCTAGAGAAATCTTCCTTCAACAACCCAATTTGCTTGAACTTGAAGCCCCTATTAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTGCCTCCTAAAGCTAATTATCTCTTTTTAGGGGATTATGTCGATCGCGGGAAGCAAAGCTTAGAAACCATATGTCTTTTACTTGCTTATAAAATCAAGTATCCTGAAAACTTTTTCCTTTTGAGGGGAAATCACGAATGCGCTTCCATTAATAGGATATATGGATTTTACGATGAATGTAAGCGAAGGTTTAATGTGAGGCTTTGGAAAGCCTTTACGGACTCTTTTAACTGCCTTCCTGTGGCAGCACTTATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCTCCCGAACTCGCCAATTTGGACCAAATCAGGATTCTGCCTCGTCCAACTGCTATTCCCGACACTGGTTTGCTCTGTGATTTGCTTTGGTCTGATCCTGGTAGAGATGTGAAGGGTTGGGGTATGAATGATAGAGGAGTTTCCTACACGTTTGGACCTGATATGGTGGCTGAATTTTTGACAAAGCATGACTTGGACCTTATTTGCCGTGCTCATCAGGTTGTAGAGGATGGTTATGAATTTTTTGCCGACAGGAAACTTGTTACGATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGAGAACTTGATGTGCTCGTTCCAGATTCTTAAGCCTGCAGAGAAAAAAGCGAAAGACTCGGAGCGGAGCGAAGGCTTTCTTCCCCTTGATGCCTTGGAGCGTCTTGTAATCGTTTATGATATATCAAATAGCGCTCGCTCCGCTCCCACACTATCTGCTCTCTCACGAAAACCTTTCAACACATCCTCAACTCTCGAAAGGATTTATTCACATTTTTGCACAGCAAAAGCCATCATCTTTATTGAGATGAACATCCATATGTGTCACACAAGTTATACCATTTCATGGAGATTCTGCCAAGCGAGGAGCTCTGGGTCCATTGAAACATACACGAGAAATGTGATTCTCACAACCGGGCATGAATCAGGGAAACATCTTGAACCAATTGCCACTCCAAGGCTGAAGTGGAAGTTCTTCTTTTGGAGTCCCTCACCAACTCATTCACTTCATCACTTGCACTTGAGCTTTGAGGAATCCGTAGCCACCACCCCAAGCTTTGACCCCACCATTTCAACTTTGGACTTGGCTTGA 1413 0.436 MSAQGQGQVQVIDEAVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCLASREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDSFNCLPVAALIDDKILCMHGGLSPELANLDQIRILPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDMVAEFLTKHDLDLICRAHQVVEDGYEFFADRKLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKDSERSEGFLPLDALERLVIVYDISNSARSAPTLSALSRKPFNTSSTLERIYSHFCTAKAIIFIEMNIHMCHTSYTISWRFCQARSSGSIETYTRNVILTTGHESGKHLEPIATPRLKWKFFFWSPSPTHSLHHLHLSFEESVATTPSFDPTISTLDLA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01629 470 Pfam Serine-threonine protein phosphatase N-terminal domain 17 64 IPR031675 -
Car02g01629 470 Pfam Calcineurin-like phosphoesterase 66 258 IPR004843 GO:0016787
Car02g01629 470 CDD MPP_PP1_PPKL 16 306 - -
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 191 218 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 270 286 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 128 152 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 162 188 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 95 122 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 66 93 IPR006186 GO:0016787
Car02g01629 470 PRINTS Serine/threonine phosphatase family signature 248 268 IPR006186 GO:0016787
Car02g01629 470 SUPERFAMILY Metallo-dependent phosphatases 26 311 IPR029052 -
Car02g01629 470 Gene3D - 9 317 IPR029052 -
Car02g01629 470 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 11 315 - -
Car02g01629 470 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 11 315 - -
Car02g01629 470 ProSitePatterns Serine/threonine specific protein phosphatases signature. 129 134 IPR006186 GO:0016787
Car02g01629 470 SMART pp2a_7 38 308 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01629 Car-Chr2 44596414 44599475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01629 45 251 Calmodulin-binding Proteins AT5G63870 31.048 2.66e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01629 K06269 - gmx:100807069 607.446