Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01622 ATGTATGGTGATAGTCCTACAAACACCATTATCACCGGACACAAGAACTCTCGTGAAGGACTTGAAACATCTAAAACCGCCACATTCTATATTGATGAAAATGTGCTTGCAGCCTTCTTGGGTCATAATTTCATTGCCAAGTCAATTGCATTTGAAAACACTGTTGGCCCAGAAGGTGAGCAAGCAGTTGCACTTAATGTTGAAGGTGATCGATTAGCATTCTTCAATTGTATATTATGCGGTTATCAAGTCACATTGTATGTAAACAATGGTCGTCAATTCTACTGCAACTGTGAGATCTACGGAACCATAGATTTCATCTTTAGTCAGTCAAGTACTACCTTGATCCAGAATTCTATGATTTGGGTGAGGAAGCCCTCTCATGGACAACAAAACGTTGTGGTGGCTGATGGTACGTCCGAAAAGACGATGGACACTGGAATAGTCCTCCAAAAGTGCTTTATCAAGCCAGACGATGATCTCTTACCAGATCAGTTGATGGTGAAGACTTATCTTGCAAGGCCATGGAAGGAATTTTCGAGGGTAGTCTTCATTAACAATTATATTGGTGATTTAATTCAACAAGATGGATATATGATTTGGAATTTTACTGAACCTAACACTAAAAACTCGTACTTCGCTGAGTTTAAAATCATTGGATCGGGTGCCAATGCTAGGATAAGGAATAAATGGGTAAAAGGTATCATTACCAAGAATGAAGATGTTAGATTCACCGTTGTACCGTGGCTTAATGCCACAACTTGA 765 0.3948 MYGDSPTNTIITGHKNSREGLETSKTATFYIDENVLAAFLGHNFIAKSIAFENTVGPEGEQAVALNVEGDRLAFFNCILCGYQVTLYVNNGRQFYCNCEIYGTIDFIFSQSSTTLIQNSMIWVRKPSHGQQNVVVADGTSEKTMDTGIVLQKCFIKPDDDLLPDQLMVKTYLARPWKEFSRVVFINNYIGDLIQQDGYMIWNFTEPNTKNSYFAEFKIIGSGANARIRNKWVKGIITKNEDVRFTVVPWLNATT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01622 254 Gene3D - 1 254 IPR012334 -
Car02g01622 254 PANTHER PECTINESTERASE 1 253 - -
Car02g01622 254 SUPERFAMILY Pectin lyase-like 1 251 IPR011050 -
Car02g01622 254 Pfam Pectinesterase 1 251 IPR000070 GO:0030599|GO:0042545
Car02g01622 254 PANTHER PECTINESTERASE 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01622 Car-Chr2 44117208 44118304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01622 1 250 Carbohydrate Esterase AT3G62170 46.640 3.79e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01622 K01051 - gmx:100808559 300.056