Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01612 ATGGCTGGGATTTGTTGTGGTGTTGTTGGAGAAGGAGAAACTCCTACTCCACCTATTGAACCAACTTCACGAACCTCCGGTCGCCGGAGTTTAGATTTAATTCCTTTGAAATACATAGCTGACATGGCAATTCCGTCAGAAAATAGCCGTAAACGTCAGAAGTTAGATCTATGCGTTTCTCCTCCGGCAAAACCGCCGCGGGAGTGTGAAAACGCGGTTGATAGCTGCGAATCAAGTACCGATGAAGAAACAAAAGAAAACGAAGTTGTCTTAACTGCCAATTGTTCAAATGTTTCTGAATCGAAAAACGAGGTTGTGGTTGAAGAGTTTCCTAAATATGGAATAACTTCGATTTGTGGAAGAAGACGAGAAATGGAAGATGCGGTTTCTGTTCATCAATCTTTTTGTCATGATGATAAAAAGATGGATGAACAAAATCAGAAACCGTTTCATTTCTTCGGAGTATACGACGGCCACGGTTGTTCACATGTTGCGACTATGTGTAAAGAAAGGTTGCATGAAATTGTTgaagatgaaatagataaagaaaaagtgaaagaaaaTGTTGACTGGAAGTCAACGATGGAGAAGAGTTTTACTAGAATGGATGAAGAGGTGTTGAGCTGGAACAAAACCAACAAAAGCTTCACTTGTAAGTGTGAGCTTCAAACTCCTCACTGTGACGCCGTTGGTTCCACCGCTGTCGTCGCCATCGTCACGCCGGAAAAAATAATTGTCTCCAATTGTGGTGATTCCCGTGCCGTTCTTTGTCGTAACGGTGTCGCCATTCCTCTTTCCTCCGATCACAAGCCGGATCGACCCGATGAATTGATTCGGATCAATTCTGCTGGAGGACGTGTTATCTATTGGGATGGTGCAAGAGTGCTTGGGGTGTTAGCCATGTCACGAGCCATAGGGGACAATTATTTGAAGCCGTACGTTATTTCGGAACCAGAGGTAACGATAACGGAGAGGAGTGATGAGGATGAGTGTTTGATACTAGCGAGTGATGGGCTATGGGACGTGGTGCAAAACGACACTGCATGTAGGGTGGTGCAGATGTGTCTGAAGGCGGAGAAGACGTTGACGTCGCCGGGGTCTCCGGGGAGTGACGTGGCAGGAGATGGGTCAGATAAGGCGTGTTACGATGCTTCAATTTTGTTGACGAAGTTAGCTTTGGCGAGGCATAGTTCAGACAATGTTAGCGTGGTTGTTGTTGATTTGAGGAGAGATCAACGTCAACAACAATAA 1251 0.4428 MAGICCGVVGEGETPTPPIEPTSRTSGRRSLDLIPLKYIADMAIPSENSRKRQKLDLCVSPPAKPPRECENAVDSCESSTDEETKENEVVLTANCSNVSESKNEVVVEEFPKYGITSICGRRREMEDAVSVHQSFCHDDKKMDEQNQKPFHFFGVYDGHGCSHVATMCKERLHEIVEDEIDKEKVKENVDWKSTMEKSFTRMDEEVLSWNKTNKSFTCKCELQTPHCDAVGSTAVVAIVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELIRINSAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTITERSDEDECLILASDGLWDVVQNDTACRVVQMCLKAEKTLTSPGSPGSDVAGDGSDKACYDASILLTKLALARHSSDNVSVVVVDLRRDQRQQQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01612 416 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 37 414 - -
Car02g01612 416 Gene3D - 99 416 IPR036457 -
Car02g01612 416 SMART PP2C_4 100 406 IPR001932 -
Car02g01612 416 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Car02g01612 416 MobiDBLite consensus disorder prediction 1 27 - -
Car02g01612 416 PANTHER ALPHABET, ISOFORM E-RELATED 37 414 - -
Car02g01612 416 CDD PP2Cc 112 359 IPR001932 -
Car02g01612 416 Pfam Protein phosphatase 2C 112 364 IPR001932 -
Car02g01612 416 ProSiteProfiles PPM-type phosphatase domain profile. 112 408 IPR001932 -
Car02g01612 416 SUPERFAMILY PP2C-like 110 409 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01612 Car-Chr2 43915655 43918112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01612 1 415 PP2C-type Phosphatase Gene Family AT3G11410 58.685 1.52e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01612 K14497 - gmx:100776356 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01612 02 43915655 43918112 Car02g01612 02 43915655 43918112 ECH
Car06g00090 06 1122106 1124241 Car02g01612 02 43915655 43918112 PCT