Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01604 ATGACAATTGGGTTTATGGAAGTGCTTCTCGTCAAAGCAAAGGGACTTCAACAGACTGATATCTTTGCTCGCATGGATCCATATGTTTTGTTACAATACAAACGTCAAGAGTGCAAGAGCGGCGTAGTTCATGAGGGGGGTAGCAGTCCTGTATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCTGGATCAGGTGACAATTACAAGCTCACCCTTAAAATCATGGACAAGGATGTATTTTCTTCAGATGACTTTGTTGGCCAAGCCATAATCTATGTAAAGGATTTATTGGAGGAAGGAGTAGAGAATGGATCAGCCGAGCTTCGTCCTCGAAAGTATAGTGTGGTTCGAGCTGACAATTCTTATTACGGTGAAATCGAAGTTGGTATAACTTTCAGTCGGAAGGAAGATGAATATAATGATGATGACATTGGAGGATGGAAGGATAGTAGTGACTATTAG 465 0.4108 MTIGFMEVLLVKAKGLQQTDIFARMDPYVLLQYKRQECKSGVVHEGGSSPVWNEKFVFRVEYPGSGDNYKLTLKIMDKDVFSSDDFVGQAIIYVKDLLEEGVENGSAELRPRKYSVVRADNSYYGEIEVGITFSRKEDEYNDDDIGGWKDSSDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01604 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
Car02g01604 154 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Car02g01604 154 Gene3D C2 domain 3 135 IPR035892 -
Car02g01604 154 SMART C2_3c 5 106 IPR000008 -
Car02g01604 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Car02g01604 154 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Car02g01604 154 Pfam C2 domain 7 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01604 Car-Chr2 43866888 43869450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01604 3 109 C2H2 Transcription Factor Family AT4G21160 32.407 1.56e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01604 - - gmx:100500493 258.84