Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01603 ATGGCAATTGGGTTGATGGAAGTACATCTTGTGAAAGCAAAAGGCCTCAATAGCACTTGTTTCTTTGGTGGAATGGAGGATCCATATGTTTTGATACAATACGAAGGCCAAGAGAAGAGGAGCAATGTTGCTAAAAGTAGAGGGAGAAATCATGTATGGGATGAGAAATTTGTATTCAAAGTTGAAAAGCATGGATCAAGTGATAAACATAAACTCATTTTTAAAATAATGGATAAAGACACATTTTCTGCTGATGACTTCATTGGACAAGCCATAATCTATGTTAAGGATTTATTGGGTGAAAGTGTGCAAAATGGAGTGGCAAAGCTACCACCTCTCAAGTATAGAGTGGTTCGTGCTGACCAATCTTATCGTGGAGAAATTGATGTTGCTATTACTTTTACTCCAAAGGTGGAAGATGGATTCATTGAAGAAGACATAGGAGGATGGAAACAAAGTAGCTACTATCTATCTTAG 477 0.3732 MAIGLMEVHLVKAKGLNSTCFFGGMEDPYVLIQYEGQEKRSNVAKSRGRNHVWDEKFVFKVEKHGSSDKHKLIFKIMDKDTFSADDFIGQAIIYVKDLLGESVQNGVAKLPPLKYRVVRADQSYRGEIDVAITFTPKVEDGFIEEDIGGWKQSSYYLS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01603 158 SMART C2_3c 5 107 IPR000008 -
Car02g01603 158 Gene3D C2 domain 2 137 IPR035892 -
Car02g01603 158 Pfam C2 domain 5 106 IPR000008 -
Car02g01603 158 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Car02g01603 158 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 154 - -
Car02g01603 158 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Car02g01603 158 PANTHER C2 DOMAIN-CONTAINING 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01603 Car-Chr2 43861785 43862950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01603 3 106 C2H2 Transcription Factor Family AT4G21160 34.615 3.29e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01603 - - gmx:100791344 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01603 02 43861785 43862950 Car02g01603 02 43861785 43862950 ECH