Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01587 ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTACTAAGGAGAAAGTGTTCTAATGATTGTGTATTTGCTCCTTACTTCTCTTATGACCAAGCTTCAACACATTTTGCAGCTGTTCATAAGGTTTATGGTGCTAGTAATGTTTCTAAATTATTGTCACATCTTCCTATTCATAATAGAAGTGATGCTGCCATCACCATTTCTTATGAAGCCTTGGCCCGCATGCAAGATCCTATTTATGGTTGTGTCGCTCATATCTATGCATTGCAACATCAGGTTGCAAGCTTACAAGAGGAGATAGATATACTTGGAAGTCTAATAGCAAATTCAAGTGTTAGTGTTGTGAATTATGACAATGTCCAAGCAACAATGAACTCAAACAATGGAACACAATATTACCATAATCAAATGGCTAATTTTCTTTCACATGAAGGAGGAGCCACATACCAAAGTTTCAACTCATACATGGATATGGAACTTCCTTATGCACATGGTTTGGCAGAACCTTTATATGGTGATTCTAACTCCAATCTATTAGAGAAGTTCCTATCAGGAATTGACCAAGAGGGATTCCTTAACCACCCTTGGTTCAAGCATAATGAAAACATGAAGAACTAG 621 0.3768 MTGFGSSCGACKLLRRKCSNDCVFAPYFSYDQASTHFAAVHKVYGASNVSKLLSHLPIHNRSDAAITISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDILGSLIANSSVSVVNYDNVQATMNSNNGTQYYHNQMANFLSHEGGATYQSFNSYMDMELPYAHGLAEPLYGDSNSNLLEKFLSGIDQEGFLNHPWFKHNENMKN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01587 206 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Car02g01587 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 205 - -
Car02g01587 206 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Car02g01587 206 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01587 Car-Chr2 43620587 43621671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01587 1 114 AS2 family AT5G06080 72.807 8.01e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g01587 LOB 8.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01587 K13945 - gmx:100809636 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01587 02 43620587 43621671 Car02g01587 02 43620587 43621671 ECH