Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01579 ATGGCCAACAAACGTGAAGGCAATATTCAATTAGACGAGGAAACATCATCAAGTGTGGATGAAGGCAACCCTTCCATCATGCAATTTTGTTGTTCATCAAACCATACTATAACCTTGATACAAAAGGTGATTGCAGAAATAATTGGGACATATTTTTTGGTGTTTGCTGGGTGTGGTGCTGTAGTAGTGAATAAAATATATGGCTCAGTCACATTTCCAGGGATTTGTATCACTTGGGGACTAATTGTAATGGTTATGTGTTACTCTCTTGGTCATATCTCTGGAGGCCACTTCAACCCTGCAGTTACCATCACTTGGACCCTCTTTCGTAGGATCTCAATTAAAGAGGCTCCACTATACATTTTTGCTCAGTTGCTGGGGTCCACACTTGCAAGTGGGACATTATCTCTAATGTTTGATATCACACCAAAAACTTATTTTGGAACGGTACCAAGTGGATCAAATGGGCAATCTTTAGTTGTTGAAATCATCATCAGTTTTCTTCTAATGTTTGTCGTTTCAGCAGTTTCCACTGATGATAGAGCGGTGAATGACATGGGAGGTGTTGCAGTTGGAATGACTATAATGTTGAATCTTTTTATTGCTGGGCCTGTATCAGGGGCTTCAATGAATCCAGCAAGAAGTATTGGGCCAGCACTTGTGAAACATATTTACAAAGGATTATGGATATACATTGTTGGTCCAATTGTTGGAGCCATAGCTGGAGCAATTGCTTATAACTTTCTTAGATCCATAGAAAAGTCACCTACAGAGTCACCATTGAGGAACATCATTGTAGTTTGA 804 0.3968 MANKREGNIQLDEETSSSVDEGNPSIMQFCCSSNHTITLIQKVIAEIIGTYFLVFAGCGAVVVNKIYGSVTFPGICITWGLIVMVMCYSLGHISGGHFNPAVTITWTLFRRISIKEAPLYIFAQLLGSTLASGTLSLMFDITPKTYFGTVPSGSNGQSLVVEIIISFLLMFVVSAVSTDDRAVNDMGGVAVGMTIMLNLFIAGPVSGASMNPARSIGPALVKHIYKGLWIYIVGPIVGAIAGAIAYNFLRSIEKSPTESPLRNIIVV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01579 267 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Car02g01579 267 Gene3D Glycerol uptake facilitator protein. 2 260 IPR023271 -
Car02g01579 267 TIGRFAM MIP: MIP family channel proteins 45 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 MobiDBLite consensus disorder prediction 1 20 - -
Car02g01579 267 PANTHER AQUAPORIN NIP4-1-RELATED 11 258 - -
Car02g01579 267 SUPERFAMILY Aquaporin-like 36 254 IPR023271 -
Car02g01579 267 CDD MIP 41 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 Pfam Major intrinsic protein 36 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01579 267 PANTHER AQUAPORIN NIP2-1 11 258 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01579 Car-Chr2 43504755 43507444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01579 10 264 Major Intrinsic Protein MIP AT5G37820 59.770 8.74e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01579 K09874 - gmx:100803763 364.77