Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01575 ATGAGAAAACCTTGTTGTGACAAAGAAAACATCAACAAAGGTTCTTGGTCTAAGCAAGAAGATCAAAAGCTAATTGATTATATACGAGTTCATGGTGAAGGCTGTTGGGGTTCCATTCCTAAGGCTGCTGGGTTGCAACGTTGTGGCAAGAGTTGTAGGCTAAGATGGTTAAACTACTTACGACCAGACATAAAACGTGGAATTTTTGCACAAGATGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTTGGCAATCGGTGGGCACTGATTGCTGGAAGATTGCCTGGTCGTACGGATAATGAAGTGAAGAACTATTGGAATTCTCACATTCGTAGAAAATTAATAAAAATGGGAATTGATCCAAATAATCACAAGCTACACCAAGGTTTTCCTCGTCCTTGTCATGTTTTTGGTGCCGGTACATCATCATGTGATGAGTCCATGAACAAAGACCATAAACTCTCCTTCACAAAAGAATTTGAAGATGATCAAGAAACAACAATCATTATTAATAATTCTTCATCCTCTTTGAATCTTGACTTAACTATTGCTTTACCTTCACCAAATAGGGTTGTTGTTGTGGACGACAAAACTATACCTAATTGTGATGAGTCTAGGACCACTCGGGATATGGATATTGATCTTAATTGTTAG 657 0.3881 MRKPCCDKENINKGSWSKQEDQKLIDYIRVHGEGCWGSIPKAAGLQRCGKSCRLRWLNYLRPDIKRGIFAQDEEDLIIKLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKLHQGFPRPCHVFGAGTSSCDESMNKDHKLSFTKEFEDDQETTIIINNSSSSLNLDLTIALPSPNRVVVVDDKTIPNCDESRTTRDMDIDLNC 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01575 218 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Car02g01575 218 Gene3D - 13 65 - -
Car02g01575 218 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 207 - -
Car02g01575 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Car02g01575 218 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Car02g01575 218 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Car02g01575 218 PANTHER MYB TRANSCRIPTION FACTOR 2 207 - -
Car02g01575 218 CDD SANT 71 111 IPR001005 -
Car02g01575 218 SMART sant 65 113 IPR001005 -
Car02g01575 218 SMART sant 12 62 IPR001005 -
Car02g01575 218 CDD SANT 15 60 IPR001005 -
Car02g01575 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Car02g01575 218 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Car02g01575 218 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Car02g01575 218 Gene3D - 68 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01575 Car-Chr2 43472823 43474211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01575 2 218 MYB Transcription Factor Family AT2G16720 46.414 3.28e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car02g01575 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01575 K09422 - gmx:100306391 307.76