Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01572 ATGGAGATTTTTCCTACAATGTTGGAGGACAATGATAGAGAGACAAGAACAGTAGCCGTACGAAAAGCCTTGGAGCTGTTACAGCTCGACGATCAGGATTTGAGGATCCAAGCCGCTAAGGATATCCGCCGCCTCACCAAAACATCCAGCTGTTGCCGCCGTCAGCTTCGTCGAGCTATTGCTCCACTTGTCTCATTGCTCCGAGTCGACTCACCCGAGTCCCACCAACACGCTCTTCTTGCTTTGCTTAACCTCGCAAGTGCATTAGAACCAATAGTTAATTTTCTCTCTTCACAAAATAAAAATCTTCAAGAGTATGCAATTGCATCATTGCTTACTCTATCAGCCTCAACAACAAACAAACCAATCATCACTTCTTATGAAACAATTCCACTTCTTATTAACATTCTTAGAGATGGAAGCCACCAAGCCAAAACAGATGCAATAATGGCTCTATCCAATTTATCAACACACTTTGACAACATCATCACTATACTAGAATCAAATCCAATTCCATTCATAGTTAACATTCTCAAAACCTCTAAAAAATCCTCAAAAACAACTGAAAAATGCTGTTGTTTGATAGAATCCTTGGTTGATTATGAAAAAGGAAGAGTCTTCTTATCGTCCGAACAAGGCGGCGTTCTTTCGGTTGTTGAAGTTCTTGAAAATGGAACACAACAAAGACTTCTTGAACTTACTCTTCAAAGAACAATGAAGTGTAGGACAAAAGCATGTACCCGTTTGCATCTACTAAGAGATTATGATGTTAATACAGAATGTGACACTCTTGATCATATGGTTTGTGATATTATAGCCAAGATTGATGGTGATGATCATGAATGTGGTAAAGCTAAGAAGATTTTGGCTGAGATGGTTCAAGTTAGTATGGAAAAGAGTTTGAGACATTTAGAACAAAGAGCTTTTCTATGCACCACAAATGATGTGTCTATTACTAATTTTAGTTGTGCTTCTCAAGTTTCTTTTAAATGA 993 0.3837 MEIFPTMLEDNDRETRTVAVRKALELLQLDDQDLRIQAAKDIRRLTKTSSCCRRQLRRAIAPLVSLLRVDSPESHQHALLALLNLASALEPIVNFLSSQNKNLQEYAIASLLTLSASTTNKPIITSYETIPLLINILRDGSHQAKTDAIMALSNLSTHFDNIITILESNPIPFIVNILKTSKKSSKTTEKCCCLIESLVDYEKGRVFLSSEQGGVLSVVEVLENGTQQRLLELTLQRTMKCRTKACTRLHLLRDYDVNTECDTLDHMVCDIIAKIDGDDHECGKAKKILAEMVQVSMEKSLRHLEQRAFLCTTNDVSITNFSCASQVSFK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01572 330 SMART arm_5 117 157 IPR000225 GO:0005515
Car02g01572 330 SMART arm_5 48 87 IPR000225 GO:0005515
Car02g01572 330 SMART arm_5 158 200 IPR000225 GO:0005515
Car02g01572 330 SUPERFAMILY ARM repeat 19 217 IPR016024 -
Car02g01572 330 PANTHER U BOX DOMAIN-CONTAINING 230 308 - -
Car02g01572 330 PANTHER U BOX DOMAIN-CONTAINING 12 228 - -
Car02g01572 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 230 308 - -
Car02g01572 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 228 - -
Car02g01572 330 Gene3D - 6 280 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01572 Car-Chr2 43442872 43446505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01572 22 228 U-box Gene Family AT3G54790 31.982 2.25e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01572 - - gmx:100780954 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00059 06 768733 772735 Car02g01572 02 43442872 43446505 PCT