Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01557 ATGGATGCGCAAGCCAAGAAAAAAGCATTGTTTCGTGCCAAATTGAATGCTCAGAAGAAGGACAAACGCATAGAATCTCCCCTTGTTAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGAAGTTGTTTTGAAGTCTGAGTCCCTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAACCTTAAAGCTAATGCGGCCGGTTTAACTAAGCATAACAATGCGAAGACTGATATTCCAAAGGCTAAACCTGAACAGCCTTCAGCCTCACAGTTCAAAGTTCCTCAAAGTTCACAGGAAGTGCCTAAACCTCAGTCATCATCAGTTCTTCCATCAGATTTTTTTGACAACAATGATGCAAAAAAAGACAAGATCTGGGGACAACTCAGAGATGTTGTAGCCATTGGAAACATAAGCATTGGAGATAGACAAGGCTGTTTGGGTCTTGGAATTGATAACATTGCCCTCATGAACACGAACTTACATTTATATAATAGGGACATATCAAGTGAGCAATGA 537 0.4097 MDAQAKKKALFRAKLNAQKKDKRIESPLVRYNEFDQPVCRVCEVVLKSESLWDAHQVSRKHREAISNLKANAAGLTKHNNAKTDIPKAKPEQPSASQFKVPQSSQEVPKPQSSSVLPSDFFDNNDAKKDKIWGQLRDVVAIGNISIGDRQGCLGLGIDNIALMNTNLHLYNRDISSEQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01557 178 MobiDBLite consensus disorder prediction 72 120 - -
Car02g01557 178 MobiDBLite consensus disorder prediction 95 120 - -
Car02g01557 178 Pfam Zinc-finger of C2H2 type 39 61 - -
Car02g01557 178 Gene3D Classic Zinc Finger 32 70 - -
Car02g01557 178 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Car02g01557 178 PANTHER UNCHARACTERIZED 1 130 IPR040050 GO:0003676|GO:0005681|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01557 Car-Chr2 43273842 43276412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01557 1 125 C2H2 Transcription Factor Family AT3G02860 57.600 9.78e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01557 K13104 - gmx:100808515 204.142