Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01549 ATGGGACAAGAACAAATTAACAAACACACCTTCGAAAAGGAGTGGGATTATCTTCCCTCCATAAAAGGTGCCGTCAAACCAACCCCATCCACGGACGAAAAAGAGGAAGCCGGAGCCGACTCCGGAACATCTTCATCCACCGGAGCTTCCTGCGCAATTCAAGGTGTTTTGATTCGAGGTGTTTTGATTGAGGCAATTCAAGTTGGGATGTTTCAGAAATTGCTTGTTTTACTGCAAGTTGGTTGTGGTGAGAATACAAAGGAGAAAGCTGCTGAGTTGTTGAAATTGTTGAATGGTTATAAGAGCAAAGCTGAGTGTGTTGATTCATCATCATTGGATTTCATGCACCTTAAGAAGCCATTTTGA 366 0.429 MGQEQINKHTFEKEWDYLPSIKGAVKPTPSTDEKEEAGADSGTSSSTGASCAIQGVLIRGVLIEAIQVGMFQKLLVLLQVGCGENTKEKAAELLKLLNGYKSKAECVDSSSLDFMHLKKPF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01549 121 PANTHER WDSAM1 PROTEIN 60 121 IPR045185 GO:0061630
Car02g01549 121 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 60 121 - -
Car02g01549 121 MobiDBLite consensus disorder prediction 20 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01549 Car-Chr2 43192586 43193086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01549 64 121 U-box Gene Family AT1G66160 55.738 4.44e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01549 - - gmx:100800966 95.5153