Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01548 ATGGGACAAGAACAAATTAACAAACACACCTTCGAAAAGGAGTGGGATTATCTTCCCTCCATAAAAGGTGTCGTCAAACCAACCCCATCCACGGACGAAAAAGAGGAAGCCGGAGCCGACTCCGGAACATCTTCATCCACCGGAGCTTCCTGCGCAATTCAAGGTGTTTTGATTGAGGCAATTCAAGTTGGGATGTTTCAGAAATTGCTTGTTTTACTGCAAGTTGGTTGTGGTGAGAATACAAAGGAGAAAGCTACTGAGTTGTTGAAATTGTTGAATGGTTATAGGAGCAAAGCTGAGTGTGTTGATTCATCATCATTGGATTTCATGCACCTTAAGAAGCCATTTTGA 351 0.4274 MGQEQINKHTFEKEWDYLPSIKGVVKPTPSTDEKEEAGADSGTSSSTGASCAIQGVLIEAIQVGMFQKLLVLLQVGCGENTKEKATELLKLLNGYRSKAECVDSSSLDFMHLKKPF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01548 116 MobiDBLite consensus disorder prediction 22 48 - -
Car02g01548 116 PANTHER WDSAM1 PROTEIN 54 116 IPR045185 GO:0061630
Car02g01548 116 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 54 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01548 Car-Chr2 43187598 43188083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01548 59 116 U-box Gene Family AT1G66160 57.377 8.33e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01548 - - gmx:100800966 101.679