Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01543 ATGAAAACTCTGAAGCTGGAAAAAACCACCGTTCTGGTTTTTTTCACGGCGTTTTTAATCGCCATTGTTTCCGACGCCGATCTAGCTTCCGACAGGTCAAGTCTATTAACACTACGCGCCGCAGTAGGAGGAAGAACTCTTCTATGGAACACGAAGGAAACAAACCCGTGTTTATGGACAGGCGTTTTCTGCAACAACAAAAGAGTAACGGCGTTAAGATTACCGGCGATGGGTTTAACCGGTAACCTTCCTTTAGGTTTAGGTAATCTTACCGAACTGCAGACACTCTCTCTCCGGTTCAACGCACTAACCGGACCAATCCCTTCCGATTTCGCAAAACTTGTTTCACTTCGTAACCTTTATCTTCATAGTAACTTTTTCTCCGGTGAGGTTCCTGAATTTATGTACACTTTGCAGAACTTGGTGCGGTTAAATTTAGGTAAAAACAATTTCAGCGGTGAAATTTCATCTAATTACAACAACTTAACTCGTTTGGATACACTCTTTTTGGATGAAAACGTGTTTACCGGTTCAGTTCCTGACCTTAACGTACCACCTTTAACTCAATTCAACGTCTCGTTTAACCGGTTAAACGGGTCAATTCCGAAAATATTTTCGCGTTTAAACATAAGCGCTTTTGAAGGAAACTCGCTTTGTGGGAAGCCACTTCAACCGTGTCCTGGTAACAATAAATTATCCGGTGGTGCCATTGCTGGTATTGTAATCGGTTCTGTTTTCGGTTTTTTGTTGATTCTGGTTCTTTTGGTCTTATTGTTAAGGAAAAGAAGAAAAAGTGATTCTGTTGAATTGGAACGTGCCAAGAGTGGTGAAGGGGAGTTGTCACGTGAGAAAATGAGTAGAGAAGTTGAGAAtggtggtggtggtggtggtggtAAttcaggtttggcttcggattcggcgatggcttcggcttcggtttcggcttcggGTGTTTCATCATTAGATAGTAAAAGTTTGATTTTTATTGGGAAAGTGGAGAGAAAATTCAGTTTGGATGATTTGTTAAGAGCTTCTGCCGAGGTTTTAGGGAAAGGGACATTTGGGACAACTTATAAGGCAACATTGGAGATGGGAATGAGTGTGGCTGTGAAGAGGTTGAAGGATGTAACAGCAATGGAGAGAGAATTCAGGGAGAAAATTGAGGAGGTTGGAAAATTGGTTCATGAGAATTTGGTCCCACTTAGGGGATATTATTTTAATAAAGATGAGAAACTTATTGTCTATGATTATATGCCAATGGGAAGCTTATCTGCACTCTTGCATGCAAATAATGGAACTGGAAGGACTCCCCTGAATTGGGAAACTAGGTCATCCATTGCCTTGGGTGCTGCCCATGGAATTGCATACCTACACTCACAAGGTCCAACATCTTCCCATGGAAACATCAAGTCCTCAAACATCCTTCTCACCAAATCATTTGAACCTCGTGTCTCTGACTTCGGCCTCGCATATCTCGCACTTCCGACCGCTACACCGAACCGAGTCTCCGGCTACCGTGCACCAGAAGTCACCGACGCCCGCAAAGTATCACAAAAGGCTGATGTCTACAGCTTTGGCATTATGCTATTGGAGCTTCTTACCGGGAAGGCTCCTACTCATTCTTCGCTGAACGAAGAAGGAGTAGACCTACCAAGATGGGTCCAGTCCGTTGTTCAAGACGAGTGGAACACTGAAGTATTTGACATGGAGCTTCTAAGGTACCAAAATGTTGAGGAGGAAATGGTGAATCTTTTGCAGCTTGCTCTTGAATGTACTGCTCAATATCCTGATAAGAGACCTTCAATGGATGTGGTGGCAAATAGGATTGAGAAAATTTGTCATTCTAGTTTAGAGAAAGAGTGA 1863 0.4074 MKTLKLEKTTVLVFFTAFLIAIVSDADLASDRSSLLTLRAAVGGRTLLWNTKETNPCLWTGVFCNNKRVTALRLPAMGLTGNLPLGLGNLTELQTLSLRFNALTGPIPSDFAKLVSLRNLYLHSNFFSGEVPEFMYTLQNLVRLNLGKNNFSGEISSNYNNLTRLDTLFLDENVFTGSVPDLNVPPLTQFNVSFNRLNGSIPKIFSRLNISAFEGNSLCGKPLQPCPGNNKLSGGAIAGIVIGSVFGFLLILVLLVLLLRKRRKSDSVELERAKSGEGELSREKMSREVENGGGGGGGNSGLASDSAMASASVSASGVSSLDSKSLIFIGKVERKFSLDDLLRASAEVLGKGTFGTTYKATLEMGMSVAVKRLKDVTAMEREFREKIEEVGKLVHENLVPLRGYYFNKDEKLIVYDYMPMGSLSALLHANNGTGRTPLNWETRSSIALGAAHGIAYLHSQGPTSSHGNIKSSNILLTKSFEPRVSDFGLAYLALPTATPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSVVQDEWNTEVFDMELLRYQNVEEEMVNLLQLALECTAQYPDKRPSMDVVANRIEKICHSSLEKE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01543 620 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Car02g01543 620 SUPERFAMILY Protein kinase-like (PK-like) 347 609 IPR011009 -
Car02g01543 620 Gene3D Transferase(Phosphotransferase) domain 1 418 620 - -
Car02g01543 620 SUPERFAMILY L domain-like 50 210 - -
Car02g01543 620 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Car02g01543 620 Gene3D Phosphorylase Kinase; domain 1 309 417 - -
Car02g01543 620 CDD STKc_IRAK 349 612 - -
Car02g01543 620 MobiDBLite consensus disorder prediction 270 289 - -
Car02g01543 620 PANTHER OS05G0588300 PROTEIN 4 617 - -
Car02g01543 620 MobiDBLite consensus disorder prediction 270 303 - -
Car02g01543 620 PANTHER INACTIVE RECEPTOR KINASE-RELATED 4 617 - -
Car02g01543 620 Gene3D Ribonuclease Inhibitor 184 230 IPR032675 -
Car02g01543 620 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Car02g01543 620 Pfam Protein kinase domain 346 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01543 620 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01543 Car-Chr2 43140049 43143314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01543 27 612 Receptor kinase-like Gene Family AT1G48480 56.592 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car02g01543 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01543 - - aprc:113846223 862.833