Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01532 ATGGTTGAAAGTCTGGTTGTTCCCACCTTTAGAGTTGGTTACACCATCACCACTGATGCACTTGATGCTCTCTACAAGAAGATCAAGTCAAAGGGAGTTACTATGACAGAATTGCTTGCCAAGGCTACTGCACTCGCACTCGCTAAACACCCTGTTATAAACTCTAGTTGTAGGGGTGCAATGCATAAGAATCGTTTGCAAGAGTTTACACAGAGGAAAGTTTCTATTCTTGCAGAGAACAAAGGTGTCTTAGAGGTTTCCACGGTCACATTTGAAGAGTGGAAAAACATGACAGAAGAACAAAAGAGACCCTATGAAGAGATGGCACAGAAAAAAGAAGAGGAAGCTGCAAATCCCGTGATGGAAGAGGAAGAGCATATGAAACTTCAGAAACATGAAACCTTGCAATTGCTCAAGAAAAATTAA 426 0.4131 MVESLVVPTFRVGYTITTDALDALYKKIKSKGVTMTELLAKATALALAKHPVINSSCRGAMHKNRLQEFTQRKVSILAENKGVLEVSTVTFEEWKNMTEEQKRPYEEMAQKKEEEAANPVMEEEEHMKLQKHETLQLLKKN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01532 141 CDD HMG-box 75 115 - -
Car02g01532 141 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 1 59 IPR045257 GO:0006086|GO:0045254
Car02g01532 141 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 1 59 - -
Car02g01532 141 MobiDBLite consensus disorder prediction 101 141 - -
Car02g01532 141 Gene3D - 1 129 IPR023213 -
Car02g01532 141 Pfam HMG-box domain 81 117 IPR009071 -
Car02g01532 141 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 1 61 IPR001078 GO:0016746
Car02g01532 141 SUPERFAMILY CoA-dependent acyltransferases 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01532 Car-Chr2 42997463 42998826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01532 1 58 Acyl Lipid Metabolism Gene Families AT3G25860 72.414 2.77e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Car02g01532 HMG_box_2 4.2e-06 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01532 K00627 - cam:101509684 120.938