Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01519 ATGGTCATGCCAACCCCTTCTTTCAGATACATGGGACCCACCTCCATGTGCACCATTTCTCCATCCTCACTAAACTCTCATTCCTATGCATCTTTCTCATTTCTCTCCCACAACATCATGAACTCCATTCTCCTCTTACCCTTACTATTCCTCTCCACTATCTTCGCTCAAAACGACGACGCTTCACTCATGCAAACACTTAAAACTAACCTCAACCCGCCCCTTTCTCTCGGTTGGTCCGACCCGGATCCATGTAAATGGAACCACGTTACTTGCTCCGATGACAACCGTGTAACACGAATCCAAATCGGTCGTCAGAATCTCCACGGTGCATTCCCTCAAACTCTTCTAAACCTAACTGAATTGCAACACTTGGAGCTTCAATTCAACAACTTCACTGGTCCTCTTCCGAGTTTAACTTCTTTAAACTCTCTTCAAGTCTTCATTGCAAGTAATAACGGTTTCACTTCATTTTCCGGCGAGTTTTTCGCCGGAAAGGAACAACTCGTTTCTTTCGAGATCGATGATAACCCTTTTGAGCCTTGGGAGTTACCTAAGTCGTTAATCAACGCTTCTTCGCTTCAGAACTTTTCTGCTAACAATGCTAATGTGAAAGGTGAGTTACCTGATTTTTTCGGTGGTGATGCTTTTCCTGTTTTGACCCTTTTGCATTTAGCTTTTAATAAGCTTGAAGGGGTATTGCCCAAGAGTTTTTCTGGTTCAAAGGTTGAGTCTTTGTGGTTGAACGGTCAAAAGAGTGATGTTAAGCTTCATGGGTCTGTGGATGTTTTGCAGAACATGACTTCTTTGACTGAGGTTTGGTTACATTCTAATGGTTTTAATGGTTCTTTACCTGAGTTTGATGAATTGAAAAGTTTAAAGGTTTTGAGTTTAAGGGATAATTCTTTTACTGGTGTTGTTCCTAGTTCGTTGGTTAGTCTTAAATCGCTTAAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGTCCATTGCCTGTTTTTGGTGATGGTGTTGAGGTTGATAATAGTAAGGATTCTAATAGTTTTTGTTTGTCTAGTTTTGGTGATTGTGATCCTAGGGTGAATGTTCTTCTTAATATTGTTGGGGCTATGGCTTATCCTTCAAGGTTTGCGGAGAGTTGGAAAGGGAATGATCCTTGTGTTAATTGGATTGGGATTACTTGTACTGATGGGAATGTTAGTGTTGTTAATTTTCAAAAGATGGGTCTTACTGGTACGATATCGCCCGAGTTTGCTAAGCTTAAGTCATTGCAAAGACTTATTCTTTCTGATAATAATCTCACTGGTTTGATTCCGGATGAGCTTACTACTTTGCCTATGCTTACTCAATTGAATGTTGCTAACAATCAGATTTATGGGAAAGTACCGAGTTTTAGGAGCAATGTGATTGTGAGTACTAGTGGGAATGTTGATATAGGGAAGGATAAAAGTAGCCAAACTTCTCAGGGTTCAGTGTCTTCTAATGGTACCGATGCGAGTGGTGGACACGGTGGGAGTTCGGTAACTGGTAGCAAAAAGTCTTCTTCTCATGTAGGAGTGATTGTGTTTTCTGTGGTCGGGGCTGTTTTCATGGCCTCTTTGATTGGTTTCTTGATTTTCTGCTTGCTTAGGATGAAGCAAAAGAAGTTAAGCAGGGTCCAGAGTCCGAATGCGCTAGTTATTCACCCTCGGCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATGAAAGTGTGAAGATAACGGTTGCAGGTTCAAGTGTCAGTGTTGGAGGCGTGAGTGAAGTCCGAACCGTAGCCGGCAGTGAGGTGGGAGATGTTCAAATGGTTGAAGCGGGAAACATGGTCATTTCGATACAGGTTCTGAGGAGTGTCACAAACAATTTCAGCGAGAAAAATATATTGGGACAAGGAGGTTTTGGAACGGTTTACAAAGGCGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGCTGGGGCAATAACTGGGAAGGGTGCGACGGAATTCAAATCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAAAAACTTCTTGTGTACGAGTACATGCCTCAGGGGACCCTGAGTAGGTATCTTTTCAATTGGCCAGATGAAGGACTCGAACCACTCGGGTGGAATAAGAGATTGACCATTGCCTTAGATGTCGCAAGGGGTGTTGAGTACCTTCATAGCTTGGCTCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAACATTCTCCTTGGAGACGATATGAGGGCAAAGGTCGCGGATTTCGGTCTTGTGCGTCTGGCTCCGGAAGGGAAAGCCTCAATTGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCGCCGGAATATGCAGTTACCGGCCGTGTGACAACTAAAGTTGACGTGTTCAGCTTCGGGGTAATATTGATGGAGCTGATAACCGGAAGAAAAGCTCTCGATGAAAGCCAACCCGAGGACAGCATGCACCTTGTAGCATGGTTCCGCAGAATGTACATAAATAAGGACTCATTCCGAAAGGCCATTGACCCGACAATTGAGATCAACGAGGAAACACTAGCTAGTATTCACACCGTAGCCGAGTTAGCCGGTCACTGCAGTGCAAGGGAGCCATATCAAAGACCTGACATGGGTCATGCTGTTAATGTACTTTCTTCTCTTGTAGAACTATGGAAACCATCTGATCAAAATTCAGAAGATATATACGGTATCGACCTTGACTTGTCTTTACCACAAGCACTCAAGAAGTGGCAGGCTTATGAAGGTGCAAGTCAAATGGAATCATCGTCTTCTTCGCTTCTGCCAAGCTTGGATAACACACAAACGAGTATACCTACTCGGCCGTATGGATTTGCCGATTCTTTTACGTCGGCAGATGGTAGGTGA 3006 0.4205 MVMPTPSFRYMGPTSMCTISPSSLNSHSYASFSFLSHNIMNSILLLPLLFLSTIFAQNDDASLMQTLKTNLNPPLSLGWSDPDPCKWNHVTCSDDNRVTRIQIGRQNLHGAFPQTLLNLTELQHLELQFNNFTGPLPSLTSLNSLQVFIASNNGFTSFSGEFFAGKEQLVSFEIDDNPFEPWELPKSLINASSLQNFSANNANVKGELPDFFGGDAFPVLTLLHLAFNKLEGVLPKSFSGSKVESLWLNGQKSDVKLHGSVDVLQNMTSLTEVWLHSNGFNGSLPEFDELKSLKVLSLRDNSFTGVVPSSLVSLKSLKVVNLTNNLFQGPLPVFGDGVEVDNSKDSNSFCLSSFGDCDPRVNVLLNIVGAMAYPSRFAESWKGNDPCVNWIGITCTDGNVSVVNFQKMGLTGTISPEFAKLKSLQRLILSDNNLTGLIPDELTTLPMLTQLNVANNQIYGKVPSFRSNVIVSTSGNVDIGKDKSSQTSQGSVSSNGTDASGGHGGSSVTGSKKSSSHVGVIVFSVVGAVFMASLIGFLIFCLLRMKQKKLSRVQSPNALVIHPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXNESVKITVAGSSVSVGGVSEVRTVAGSEVGDVQMVEAGNMVISIQVLRSVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECAGAITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRYLFNWPDEGLEPLGWNKRLTIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEDSMHLVAWFRRMYINKDSFRKAIDPTIEINEETLASIHTVAELAGHCSAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDLSLPQALKKWQAYEGASQMESSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01519 1001 SMART serkin_6 647 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01519 1001 SMART LRR_typ_2 217 240 IPR003591 -
Car02g01519 1001 SMART LRR_typ_2 445 467 IPR003591 -
Car02g01519 1001 SMART LRR_typ_2 142 165 IPR003591 -
Car02g01519 1001 SMART LRR_typ_2 421 444 IPR003591 -
Car02g01519 1001 SMART LRR_typ_2 290 313 IPR003591 -
Car02g01519 1001 CDD STKc_IRAK 653 927 - -
Car02g01519 1001 Gene3D Transferase(Phosphotransferase) domain 1 726 945 - -
Car02g01519 1001 Gene3D Ribonuclease Inhibitor 57 357 IPR032675 -
Car02g01519 1001 Coils Coil 594 595 - -
Car02g01519 1001 MobiDBLite consensus disorder prediction 480 510 - -
Car02g01519 1001 SUPERFAMILY Protein kinase-like (PK-like) 624 932 IPR011009 -
Car02g01519 1001 PANTHER OSJNBA0070M12.3 PROTEIN 50 567 - -
Car02g01519 1001 PANTHER OSJNBA0070M12.3 PROTEIN 593 1001 - -
Car02g01519 1001 Gene3D Phosphorylase Kinase; domain 1 609 725 - -
Car02g01519 1001 MobiDBLite consensus disorder prediction 968 1001 - -
Car02g01519 1001 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Car02g01519 1001 Pfam Leucine rich repeat N-terminal domain 58 93 IPR013210 -
Car02g01519 1001 Pfam Leucine rich repeat N-terminal domain 362 395 IPR013210 -
Car02g01519 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Car02g01519 1001 ProSiteProfiles Protein kinase domain profile. 647 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01519 1001 PANTHER RECEPTOR PROTEIN KINASE TMK1 593 1001 - -
Car02g01519 1001 PANTHER RECEPTOR PROTEIN KINASE TMK1 50 567 - -
Car02g01519 1001 SUPERFAMILY L domain-like 81 465 - -
Car02g01519 1001 Pfam Protein tyrosine and serine/threonine kinase 650 875 IPR001245 GO:0004672|GO:0006468
Car02g01519 1001 Gene3D Ribonuclease Inhibitor 359 483 IPR032675 -
Car02g01519 1001 MobiDBLite consensus disorder prediction 968 990 - -
Car02g01519 1001 Pfam Leucine rich repeat 418 458 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01519 Car-Chr2 42512590 42516035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01519 101 917 Receptor kinase-like Gene Family AT1G55610 28.722 2.02e-74 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Car02g01519 PK_Tyr_Ser-Thr 8.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01519 - K00924 aprc:113846741 1468.75