Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01511 ATGTCGTTACTTTCTttcttcttcttcttcttcttcttcttcttcttAGCTCTTCCATTTTTCAACCTCTCAATAACCGCTTCCACCGAATTCGACTTCGGAACTTTAACTCTCACAAGCCTCAAACTTCTCGGCGACGCTCACTTAAACAACGGCACCGTTAGTCTCACTCGCGACCTCGCCGTTCCATTTTCCGGCGCCGGTCAAGCTTTTTATTCCCGTCCGATAAAATTCCGGCAACCAGAAACTCACATTCTAGCTAGCTTCACAACCTTTTTCTCATTCTCCGTCGCAAATTTAAACCCTTCTTCAATCGGCGGTGGTCTCGCCTTTGTTATTACACCGGACGATGATTCACTCGGCGACGCCGGTGGTTATCTCGGTCTCGCCGCCGATGGGTTTTTTGCAGTTGAATTTGATACCCTAATGGACGTTGAATTTAAAGATATTAATGGGAATCATGTTGGGGTTGATCTTAATAGTGTTGTTTCTAATAAAGTTGGTGACTTGGATTCAATTGGGATCGATCTTAAAAGTGGTGACACGGTTAATGTGTGGATTGAATTTGATGGATCTAGTAATGGGTTTAATGTTTGGGTTTCTTATTCAAATCTTAAACCAAAAGATCCAATTTTGTCTATGAATCTTGATATGGGTCAGTACTTGAATGATTTTATGTATGTAGGGTTTTCTGGTTCAACGCAAGGTAGTACAGAGACTCATAGGGTTGAATGGTGGAGCTTTAGCTCCTCTTTTGTTTCGAGTTCGGGTTATCCTTCGGGTTCGCCGCCTCCTCCGGCAGTTAATTTGATGAATTCGACGGCTGAGTCGGTGAGGTCGACGCCTCCTTCGATGGCTCCTTCGGCGAATTCTTCAAATGTGGAAGGGAAAGTGAGTAAGTCTTCTTGTCATAATGGGTTGTGTAAGCAGGGTTTGGGAGCTGTTGCTGGTGTTGTTACTGCTGGTGCTTTTGTTTTAGCACTTTTTGCTGGTTCTTTCTTTTGGTTTTATACTAAGAAAGTGAAGCGTGTGAGTAGATTTGATTCTCTTGGATCGGAGATAATCAAAATGCCTAAGCAGTTTAGTTATAAGGATCTTAAATCTGCTACAAAGTGTTTCAATGCTAATAGGATTATTGGTCATGGTGCTTTTGGGACTGTGTATAAGGGAATTTTGGCAGAGAATGGTGACATTGTTGCTGTGAAGAGGTGTAGTCATAGTAGTCAAGGTAAGAATGAGTTTTTATCTGAGTTGTCTATAATAGGTAGCCTTAGGCATAGGAATCTTGTTAGGCTTCAAGGATGGTGTCATGAGAAAGGCGAGATTTTGTTGGTGTATGATTTGATGCCTAATGGGAGTTTGGATAAGGCTTTGTTCGAGGCTAGGACGCCTCTTCCGTGGTCACACCGGCGCAAAATTTTGTTGGGTGTGGCGTCTGCTTTGGCTTACTTGCATCAGGAGTGTGAAAATCAGGTGATTCATAGAGACATAAAGACCAGTAACATAATGTTAGACGAAGGGTTCAATGCGCGATTGGGAGATTTCGGATTAGCAAGGCAAACGGAGCATGACAAGTCTCCGGATGCCACGGTGGCTGCTGGAACAATGGGGTATCTAGCACCTGAGTATCTACTCACAGGTAAAGCGACCGAGAAAACCGACGTGTTCAGTTACGGTGCTGTGGTTCTTGAGGTGGCTAGTGGAAGGAGACCTATAGAGAAAGATGCTGCGGGTGCCGGTAAAGTCGGGGTTAGTAGCAATTTGGTGGAATGGGTTTGGAGTTTGCATAGGGAAGGAATGTTGCTAATGGCTGCTGATCCGAGGCTCGAGGGTGAATTTGATGAAGGGGAGATGAGAAGGGTACTATTGGTCGGGCTAGCTTGTTCTCACCCCGATCCAATGACTAGACCGACAATGAGGTGTGTGGTTCAAATGCTAGGGGGTGAGGCTGAAGTGCCAATTGTCCCGAGAACTAAACCAACAACAACGGGTCTCAGTACTTCACACTCCCACCTCTTACTAAGTTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACAATCTCTTCTTCCACATCAGAGAACAGTTTCAATGGTGGAGATATAGTCTGA 2115 0.4383 MSLLSFFFFFFFFFFLALPFFNLSITASTEFDFGTLTLTSLKLLGDAHLNNGTVSLTRDLAVPFSGAGQAFYSRPIKFRQPETHILASFTTFFSFSVANLNPSSIGGGLAFVITPDDDSLGDAGGYLGLAADGFFAVEFDTLMDVEFKDINGNHVGVDLNSVVSNKVGDLDSIGIDLKSGDTVNVWIEFDGSSNGFNVWVSYSNLKPKDPILSMNLDMGQYLNDFMYVGFSGSTQGSTETHRVEWWSFSSSFVSSSGYPSGSPPPPAVNLMNSTAESVRSTPPSMAPSANSSNVEGKVSKSSCHNGLCKQGLGAVAGVVTAGAFVLALFAGSFFWFYTKKVKRVSRFDSLGSEIIKMPKQFSYKDLKSATKCFNANRIIGHGAFGTVYKGILAENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDAAGAGKVGVSSNLVEWVWSLHREGMLLMAADPRLEGEFDEGEMRRVLLVGLACSHPDPMTRPTMRCVVQMLGGEAEVPIVPRTKPTTTGLSTSHSHLLLSLQDSVSDCDGIITISSSTSENSFNGGDIV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01511 704 ProSiteProfiles Protein kinase domain profile. 373 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01511 704 Gene3D Phosphorylase Kinase; domain 1 337 448 - -
Car02g01511 704 SUPERFAMILY Protein kinase-like (PK-like) 355 663 IPR011009 -
Car02g01511 704 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Car02g01511 704 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 27 697 - -
Car02g01511 704 Gene3D - 27 258 - -
Car02g01511 704 Gene3D Transferase(Phosphotransferase) domain 1 449 653 - -
Car02g01511 704 MobiDBLite consensus disorder prediction 267 293 - -
Car02g01511 704 CDD lectin_legume_LecRK_Arcelin_ConA 45 246 IPR001220 GO:0030246
Car02g01511 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Car02g01511 704 Pfam Protein kinase domain 374 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01511 704 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 264 IPR013320 -
Car02g01511 704 MobiDBLite consensus disorder prediction 263 293 - -
Car02g01511 704 CDD STKc_IRAK 379 646 - -
Car02g01511 704 PANTHER - 27 697 - -
Car02g01511 704 SMART serkin_6 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01511 704 Pfam Legume lectin domain 29 252 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01511 Car-Chr2 42359508 42361622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01511 8 686 Receptor kinase-like Gene Family AT3G53380 70.809 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car02g01511 Pkinase 3.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01511 - - gmx:100793157 1048.88