Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01499 ATGGCACCTGTTTCATTGCCTCCAGGTTTCAGGTTTCACCCTACCGATGAAGAACTTGTTGCTTATTATCTAAAAAGGAAGATCAATGGTCGAAATATTGAGTTGGAGATCATAGCTGAAGTTGATCTTTATAAGTGTGAACCTTGGGACTTGCCAGGAAAATCATTATTACCAGGGAATGATATGGAGTGGTATTTCTTTAGCCCTCGAGATAGGAAGTACCCGAATGGATCAAGAACGAATCGTGCAACAAAATCTGGATATTGGAAAGCAACAGGGAAGGATAGAAAAGTAAATTCAGAAGCTCAAGCAGTTGGGATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCTCATGGTTGTCGCACTAATTGGGTTATGCATGAATATCGTCTTCATGATAGGGAATGTGAAACTACATCAGCATTGCAGGATGCATATGCTCTTTGTCGTGTGATCAAGAAGAATACAGTCATTGTGCCTAAAGTTGGGGGACAATATGGTAATCTTACAACCCATGATAACCAAATTACAACCGTTTCTCAAGGAAGAGGTGAAGATTTAGATAGTTCAAATTATTTGATGCAAATCAACACTTGTTCACCTCACAATATTGGAAATCAGATTTCACTCAATAGGGATCATGGAAATTGCTCACACTTCTCATATGATGATCCATCATTCACTCTTCCAACTTCTTCATCATTTACTAATCATGGACCTATAGCATACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACTATGCCTCCATTGGTGGTGGAGGACTTTCCTCAAGGAAGCAAAACTAAAACTGATATCTTGCAAGAAATTCTTTCACATACTCATGCTTCTCAAGAATTGATGAATCAATCAAATTATTCACAAGCGTATGATGACAATGAAAATTATGCTCCTTGTGAAGATGATTTTACTTTCATGGTTGGCACAAACTATAACCACATAAATGATTTGAACTCCATGAGTTATGTTGACAAACCTTGGGAAGATTTGAGCACAAGATCTATAGAGATAGGTGATCAAGATGAAGAGTTTAAGGAAAAGAGGATGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGCAGAACAAAAGGTTGTCCAAATTGAGGATATTTCATGCTTCCAAACAATAAGGGAGCAAAATGGCATGCAAGAATATGACCAACACAATAGCAACCTTGATGTCAACGAATTCTCAATAGGATTCATCAATGATGGTGACCCCAATGAAAATTTTATAGAAGATGGTAACATGGATGATTACTCAAGTTCTCCAAGCTTTTATGAGGTCATTGAGGAAATAAAGGTGAGTCATGGATTGCTTGTTTCAACTCAACAAGTAGCCATGACATTCTTTCACCAAGTTGTTCCTTCACAAATAGTTCAAGTTCAACTCAATCCAAAAATGATAGAAAAAAATAACCACTCTATAAAGAATGTAGAGGCAATGATGATGATAATGGAGAATCAAGGATCTCTTTTTAGGAAGTTCAAGGCCTATGTGATGGGGAATTTAATAAATCCATCTAAGAAAATAGCAAGTTTGGTTGTATTTTTATTTTCACTTCTTTTGATGCATTGTGTTTATATGGAGAAAGAAGTGGAAATTTGGAAACAAAACCTAGAAAATGTGAAAGAGAAAAGAATGAGAGAATCATATGAGATTATCAAATGGAATGAGTCAAAAGAGGTTTGGTTTGTTGGTGTTAAAAGTGAGAAAGGATTAAGTGTGGTCTTGAAGAAAATAGGCATTTTCCTCACCATGTGTTTGGCTCTTTGTTTCATGTGGGCAAGCCATAGTAATTAA 1875 0.3675 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRNIELEIIAEVDLYKCEPWDLPGKSLLPGNDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSEAQAVGMKKTLVYYRGRAPHGCRTNWVMHEYRLHDRECETTSALQDAYALCRVIKKNTVIVPKVGGQYGNLTTHDNQITTVSQGRGEDLDSSNYLMQINTCSPHNIGNQISLNRDHGNCSHFSYDDPSFTLPTSSSFTNHGPIAYPPSKVDIALECARMQHRFTMPPLVVEDFPQGSKTKTDILQEILSHTHASQELMNQSNYSQAYDDNENYAPCEDDFTFMVGTNYNHINDLNSMSYVDKPWEDLSTRSIEIGDQDEEFKEKRMVENLRWIGMPREDFEKMAEQKVVQIEDISCFQTIREQNGMQEYDQHNSNLDVNEFSIGFINDGDPNENFIEDGNMDDYSSSPSFYEVIEEIKVSHGLLVSTQQVAMTFFHQVVPSQIVQVQLNPKMIEKNNHSIKNVEAMMMIMENQGSLFRKFKAYVMGNLINPSKKIASLVVFLFSLLLMHCVYMEKEVEIWKQNLENVKEKRMRESYEIIKWNESKEVWFVGVKSEKGLSVVLKKIGIFLTMCLALCFMWASHSN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01499 624 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Car02g01499 624 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Car02g01499 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 364 - -
Car02g01499 624 Coils Coil 550 570 - -
Car02g01499 624 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Car02g01499 624 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 364 - -
Car02g01499 624 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01499 Car-Chr2 42251230 42255716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01499 1 552 NAC Transcription Factor Family AT1G65910 44.502 1.69e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g01499 NAM 9.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01499 - - gmx:100809019 857.825