Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01483 ATGTCTGCTCCAAACTCCAACAACCAATCCTCAGATAAAAGACCCATTACATTTGACAACTCCACCACCGTGGGAGCCAAGAGAGTTCACATGGATTCTCAAACCACCAACGAAAATTTCATGCTGCCACCAGAAACAGAGGAGGATCTAATTGAATCCTCAACCATGATGAAACCACCTGTGATTTTGAATGAAAACATTGAAGCATTCATTGAACCAATTCTGATTGAGATATCTTGTGGAGAAGATATCGTGGAGAGTCTAATCAACTTGGCTCGTTTCCATCAAGCTGGTATCGTTGTTTTAAGTGGTTTGGGTCCTGTCACTGATGTTACTCTTCTCCATCCACTTACTCATACCCCTGCTTTTCCTATTCAAGGACCCTTCAACATGTTATCACTCTCTGGTACTTATATTAATCCTAATTGTGGATATATACCTCCTCGTTTCATCATCAACCCTCCATGTTCTTCTTTTTCTGTTTTTCTTGATGGCACTCGTAGACAAGTCTTTGGTGGTGTTATTGGAGGGAGAGttatgtctgctggttctgttgttgtttctgttgctcttATTAAGAGCTTTGAGTTTCATCGTTTGATCCAAATTAATGGACAAGTTCGTGAGTTTGAAGGTGATGATTCAACCTATGGTGGTCTCATCCCTACTCATTTTGCACCCAACAACAATGCTTTTATGGCTTCAGGATCTGGTGGTGTGGGTCCCAGTCAAACTGAGATGAATCAACAAATGCTGTCTTCTTCTTTTCCAATGGATCTCAATGTCATGCAATGGAATCACTCCACTCGCACTGATCATAACGAGTCTCAACCAAAAGACTCTTAA 846 0.3936 MSAPNSNNQSSDKRPITFDNSTTVGAKRVHMDSQTTNENFMLPPETEEDLIESSTMMKPPVILNENIEAFIEPILIEISCGEDIVESLINLARFHQAGIVVLSGLGPVTDVTLLHPLTHTPAFPIQGPFNMLSLSGTYINPNCGYIPPRFIINPPCSSFSVFLDGTRRQVFGGVIGGRVMSAGSVVVSVALIKSFEFHRLIQINGQVREFEGDDSTYGGLIPTHFAPNNNAFMASGSGGVGPSQTEMNQQMLSSSFPMDLNVMQWNHSTRTDHNESQPKDS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01483 281 MobiDBLite consensus disorder prediction 1 40 - -
Car02g01483 281 Gene3D - 71 213 - -
Car02g01483 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 201 - -
Car02g01483 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 58 269 IPR014476 GO:0003680
Car02g01483 281 ProSiteProfiles PPC domain profile profile. 68 213 IPR005175 -
Car02g01483 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 58 269 - -
Car02g01483 281 CDD DUF296 73 189 IPR005175 -
Car02g01483 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 191 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01483 Car-Chr2 42028827 42029774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01483 58 200 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.162 7.03e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01483 - - cam:101511090 556.599