Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01462 ATGGCAAAGGGTTGCAATAACTATGAGGAGGCTAGAAAACTAAGACTTGAAGAAAACAAGAAGAGGTTTGAGGATTTAGGGATTTCAAAGATTTCAAAAAAGTTGACTAAAATCAAAAGTCCTGCAAAGAAGTCCCCGAGTCGTTTTCTCAAACCAAATTCAAAGACTAACGGTGTAGTGGAACCTAGGCGATCTTCTCGTGCAAGAAACTCAGTTTCTTCGTACCGTGAAGAGTTTAGCATGGACCTTCCACATAGGAGTTCATATATACGGAAGAGGTCAAGGTCGAGTTCATCATCATGGGAAAGTTACATTGCAAGGCCACTAGAAGAAATCAAAGAAGCTACAAGAGAAGAAAGAATACGTGCTTTGGAGGCTGCAGAGAAACTCCAAAACAATTTGCAGTCTTCGAATCCATCATTTGTCAAATCAATGGTCCGGTCTCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCTAGTAGATTTTGTGAGGAACATCTTCCAAAAACGGTGTATAACATGGTTTTAGAGGATGAAGATGGCTCGGAAACTGATGCTGTTTACATTGGCAATAGAAGTGGGCTCAGTGGTGGCTGGAGAGGATTTGCATTGCATCATAAGTTGGATGATGGTGATGCACTTGTTTTTGAATTGGTTGAACCAGCAAGATTTAAGATTTATATTGTTAGAGCATTTCCAAAATCAGATGAAGAAGAAGAAAATGATACATTGGTGGAGGAAGAAAATGTGCATAAATCCAAAGCAACAAAAGAATCTAAGGGCTCCGGTAATCGCCAATCAGAATCAAAGAAGACCAAAAGGCAAAAACAGGCCATTGTATGTGAAACTAAGGAATCCGAGAGTTCTAAAGAAAGTATGCCAGAAAGTAGCATCAACAAAGATTCCAAACTGAAGAGGGTAAATCCGAAAAGAAGAACTAAATCTTTTCAGAAAAACGTGCAAAAGAAATCTAAACTACCTACCACTCCTGACTCCGAGTCCAAAGAGGAAGCAAAAGTTGAAACACTGAAACTAGAGACAACTATAAGGAAAACTAGGTCTTCTCAGAAGAAAATGCAAAAGATATCTGAAGTACCTACAACTCCAGACTCTGAGCCAAAAGAGGAAGCAAAAATTGAATCACTGAAACCAAAGGCAGCTATAGCGAAAACTAGATCTTCACAGAGAAAAATGGAAAAGATGTCTGAAGTACCTACAACTCCGGACTCCCAGCCAAAAGAGGAAGCAAAAATTGAATCACTGAAACCAAAGGCAGCTATAGCGAAAACTAGATCTTCACAGAGAAAAAGGCAAAAGATATCTGAAGTACCTACAACTCCGGACAACGAGCCAAAAGAGGAAGCAAAAATTGAATCACTGAAACCAAAGGCAGCTATAGCGAAAACTAGATCTTCACAGAGAAAAATGCAAAAGATATCTGAAGTACCTACAACTTCGGACTCCAAGCCAAAAGAGGAAGCAAAAATTGAAACTCTGAAACCAAAGGCAGCTATAGCGAAAACTAGATCTTCACAGAGAAAAAGGCAAAAGATATCTGAAGTACCTACAACTCCGGACAACGAGCCAAAAGAGGAAGCAAAAATTGAAACACCGAAACCGAATGCAGCTATAGCGAAAACTAGATCTTCACAAAGAAAAATGCAAAAGACATCTGAAGTACCTACTACTTCAAAAGGTGAAGCACTAGTTGAAACTATGAAACCAAAGGCAGCTACAAAGTTGTCAaagaagaaaaagaagtcagaagaagGTAATGCATGTGAAATTGGCGACTCGGGCAATACCAAGCAACTTTTGGAAGATAATGTTGTTAAAATAATTGAAGTTAACCCGAGTGAGAAGAAAGAAGTTATTGAGGATGCTGATATTGAATTGAAGAAAGTCGAGCGAGATGAAAAAGCGAGCAAATGTGATTCGCAAAAACCTCGAAAAAAACCAACTCAGAGGTTTTTCAGAAAGAGAGCATAG 1989 0.3856 MAKGCNNYEEARKLRLEENKKRFEDLGISKISKKLTKIKSPAKKSPSRFLKPNSKTNGVVEPRRSSRARNSVSSYREEFSMDLPHRSSYIRKRSRSSSSSWESYIARPLEEIKEATREERIRALEAAEKLQNNLQSSNPSFVKSMVRSHVYSCFWLGLPSRFCEEHLPKTVYNMVLEDEDGSETDAVYIGNRSGLSGGWRGFALHHKLDDGDALVFELVEPARFKIYIVRAFPKSDEEEENDTLVEEENVHKSKATKESKGSGNRQSESKKTKRQKQAIVCETKESESSKESMPESSINKDSKLKRVNPKRRTKSFQKNVQKKSKLPTTPDSESKEEAKVETLKLETTIRKTRSSQKKMQKISEVPTTPDSEPKEEAKIESLKPKAAIAKTRSSQRKMEKMSEVPTTPDSQPKEEAKIESLKPKAAIAKTRSSQRKRQKISEVPTTPDNEPKEEAKIESLKPKAAIAKTRSSQRKMQKISEVPTTSDSKPKEEAKIETLKPKAAIAKTRSSQRKRQKISEVPTTPDNEPKEEAKIETPKPNAAIAKTRSSQRKMQKTSEVPTTSKGEALVETMKPKAATKLSKKKKKSEEGNACEIGDSGNTKQLLEDNVVKIIEVNPSEKKEVIEDADIELKKVERDEKASKCDSQKPRKKPTQRFFRKRA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01462 662 MobiDBLite consensus disorder prediction 328 353 - -
Car02g01462 662 Gene3D - 115 232 IPR015300 -
Car02g01462 662 MobiDBLite consensus disorder prediction 34 71 - -
Car02g01462 662 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 5 245 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 368 385 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 636 652 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 470 484 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 543 565 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 636 662 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 410 424 - -
Car02g01462 662 SUPERFAMILY DNA-binding pseudobarrel domain 135 230 IPR015300 -
Car02g01462 662 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 245 IPR044837 -
Car02g01462 662 MobiDBLite consensus disorder prediction 47 71 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 513 537 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 245 304 - -
Car02g01462 662 CDD B3_DNA 139 230 IPR003340 GO:0003677
Car02g01462 662 MobiDBLite consensus disorder prediction 305 319 - -
Car02g01462 662 Pfam B3 DNA binding domain 141 229 IPR003340 GO:0003677
Car02g01462 662 MobiDBLite consensus disorder prediction 485 502 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 238 600 - -
Car02g01462 662 MobiDBLite consensus disorder prediction 435 463 - -
Car02g01462 662 SMART B3_2 141 235 IPR003340 GO:0003677
Car02g01462 662 Coils Coil 113 133 - -
Car02g01462 662 ProSiteProfiles B3 DNA-binding domain profile. 141 232 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01462 Car-Chr2 41756226 41762658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01462 8 231 B3 DNA Binding Superfamily AT5G58280 54.183 1.23e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car02g01462 B3 1.5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01462 - - cam:101498339 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01462 02 41756226 41762658 Car02g01462 02 41756226 41762658 ECH