Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01461 ATGATGTATTTTTCAAAGGGTTGTAAGTGTGAAATtgttctctgctttctgttctgtttctgttttctattGGCTATTGGTCAGAGAACTCACCCAAATGAAGTTGACACATTGAGAATCATAAGGAAAAGTTTGATTGATATTAATGGAAACTTGAGTACTTGGAATCATGGAGACCCATGTACATCCAAGTGGACAGGGGTTATGTGCTCTAATTCAACATTAGTGGATGGCTTTCTACATGTTCAAAGATTGCATCTAATGAATATGAGCTTGTCTGGAACTTTGGCACCTGAGATTGGCAACTTATCTCATCTTAAAATATTGGACTTTATGTGGAACAACATAAGTGGGAGTATTCCAAAGGAAATTGGCAACATCAAAACTTTAAAACTCTTGCTATTGAATGGAAATCAACTAATAGGTCATTTACCAGAAGAGCTTGGCTATCTACCAGTTCTGAACAGAATACAAATTGATCAGAACAATATTACAGGACCAATACCTTTATCTTTTGCAAACCTTACAAAGGCACAACACTTTCACATGAACAATAATTCACTTAGTGGACAAATTCCATCACAGCTTTCTGGCTTAAGAAACCTTATTCACCTTCTTCTTGACAACAATAATTTATCAGGATACCTCCCAGATGAGCTTGCTGAGATGCCAAGCCTAAAGTTACTtcaacttgataacaacaactttggtggaaatagcattccagattcttaTGGCAACATGTCAAAATTATTAAAATTGAGTCTTAGGAACTGCAATTTGACAGGACCAATTCCTGATTTAAGCAGGATACCACACCTTGGTTATCTTGACCTCAGTTTCAATCAGTTGAATGAATCAATTCCTACGAATAAGCTATCTGAAAATATCACAACCATTGATTTATCAAATAATAAGCTTAATGGAACTATTCCATCTAACTTTTCTGGCCTTCCACGTCTTCAGAAATTGTCAATTGCAAACAATGCACTGAATGGCAATGTTCCCTCTTCCATTTGGCAGAACAAGGCTTTAAATGGAACAGAAAAACTTCTCTTGGACATGCAAAATAATCAACTTACAAACATATCAGGAAGTACAACAAATCTTCCTCCAAATGTCACACTCATGCTTGAGGGGAATCCTTTATGCTCAAATAACAACAACACCTTAATTCAATTCTGTGGATCTGAAAGTGAAAATGATATGAATGGTAACTCAAATGTTAGCTGTCCAAGTCAACCATGCCCTCCTCCATATGAATACTCTATAGAGTGTTCCTGTGCAGTGCCATTACTCGTTTATTATCGGTTAAAAAGTCCCGGATTCTCGGACTTCCATACATATGTGGAAGTATTTGAAAGCTTCCTAACAGATGGTCTTGACATACATAGAAATCAGCTATTCATTAATAGTTTTACGTGGGAAGATAGTCGATTGCGAATGCATTTGAAGCTTTTTCCTGTGTATGTTAATGATACAAGCTCTCATACTTTCAATGAAAGCGAGGTTATTCGGCTAAGAGACTTGTTCAGAGAATGGGACATTCATGAGAGTGACTTGTTTGGACCTTATGAGCTTTTAGACTTTGTTCTCCTTGATCCTTACAAAGATGTGAGTGTGACCTCTTCAAGTTCAGGAATAAGCAAAGGTGCAGTGGCTGGAATTGTCTTAGGTGCAATTGCTTGTTCAGTTACATTATCAGCAATTGTTGCCATTCTTATATTGAGAATACGTTTGAAAGATTATCGTACATTTTCCAAACGGCGTAAAGCTTCTATGATCTCAATAAAAATTGATGGTGTAAGATCATTCAAGTATGAAGAAATGACTTTAGCTACAAACAACTTTAGCCAATCTGCACAAGTTGGACAAGGTGGTTATGGAAAAGTTTATAAAGGTAATCTTCCTGATGGAACTGTTGTTGCCATAAAACGTGCACAACAAGGTTCACTGCAAGGTGAAAAGGAGTTTCTTACAGAAATACAATTGCTATCAAGGTTACATCATCGCAACCTTGTGTCTCTCATAGGATACTGTGATGAAGATGGTGAACAGATGTTGGTTTATGAATATATGCCAAATGGAACATTAAAGGATCACATTTCTGCACATTCTAAAGAACCTCTTAGTTTTAGCATGAGATTGAAGATTGCTTTAGGGTCAGCTAAAGGTCTAGTGTATCTACACACAGAGGCTGATCCTCCAATATTCCACAGAGATGTTAAGGCAAGTAACATATTATTAGACTCAAAGTTCATAGCAAAAGTTGCTGATTTTGGACTTTCAAGACTAGCTCCAGTTCCTGATGTTGAAGGCAATTTGCCTGCTCATGTATCTACAGTTGTAAAAGGGACCCCGGGTTACCTTGATCCAGAGTATTTCTTAACTCACAAGTTAAGTGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTTGAAGTTGTCACTGGAAAACCACCAATCTTCCATGGTGAAAATATTATTAGACAGGTTAAACTAGCATTCGAATCAGGTGGAATATTCTCAATTGTCGATAATCGAATGGGATTTTACTCTTCTGAGTGTGTAGAAAAGTTTTTGACATTGGCTTTAAAGTGTTGCAAAGATGTACCAGATGAAAGACCTAAAATGGAAGAAGTGGCTAGAGAACTTGAAAACATACTGTCTATGATGCCTGAGTACCATGCAAACAAGGGACATGAATATGACAAAAGTGATTCTGGAATAACATTTAGCTCACAACCTTCATCATCTAATACAAAGATTTCTTTTATTTCAGATAATTTGTTGGGTAGTGACCTTGTTAGTGGAGATATACCTATCATTAGACCAAGATAG 2844 0.3562 MMYFSKGCKCEIVLCFLFCFCFLLAIGQRTHPNEVDTLRIIRKSLIDINGNLSTWNHGDPCTSKWTGVMCSNSTLVDGFLHVQRLHLMNMSLSGTLAPEIGNLSHLKILDFMWNNISGSIPKEIGNIKTLKLLLLNGNQLIGHLPEELGYLPVLNRIQIDQNNITGPIPLSFANLTKAQHFHMNNNSLSGQIPSQLSGLRNLIHLLLDNNNLSGYLPDELAEMPSLKLLQLDNNNFGGNSIPDSYGNMSKLLKLSLRNCNLTGPIPDLSRIPHLGYLDLSFNQLNESIPTNKLSENITTIDLSNNKLNGTIPSNFSGLPRLQKLSIANNALNGNVPSSIWQNKALNGTEKLLLDMQNNQLTNISGSTTNLPPNVTLMLEGNPLCSNNNNTLIQFCGSESENDMNGNSNVSCPSQPCPPPYEYSIECSCAVPLLVYYRLKSPGFSDFHTYVEVFESFLTDGLDIHRNQLFINSFTWEDSRLRMHLKLFPVYVNDTSSHTFNESEVIRLRDLFREWDIHESDLFGPYELLDFVLLDPYKDVSVTSSSSGISKGAVAGIVLGAIACSVTLSAIVAILILRIRLKDYRTFSKRRKASMISIKIDGVRSFKYEEMTLATNNFSQSAQVGQGGYGKVYKGNLPDGTVVAIKRAQQGSLQGEKEFLTEIQLLSRLHHRNLVSLIGYCDEDGEQMLVYEYMPNGTLKDHISAHSKEPLSFSMRLKIALGSAKGLVYLHTEADPPIFHRDVKASNILLDSKFIAKVADFGLSRLAPVPDVEGNLPAHVSTVVKGTPGYLDPEYFLTHKLSDKSDVYSLGVVFLEVVTGKPPIFHGENIIRQVKLAFESGGIFSIVDNRMGFYSSECVEKFLTLALKCCKDVPDERPKMEEVARELENILSMMPEYHANKGHEYDKSDSGITFSSQPSSSNTKISFISDNLLGSDLVSGDIPIIRPR 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01461 947 SUPERFAMILY Protein kinase-like (PK-like) 602 900 IPR011009 -
Car02g01461 947 Gene3D Ribonuclease Inhibitor 193 293 IPR032675 -
Car02g01461 947 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Car02g01461 947 Gene3D Ribonuclease Inhibitor 294 399 IPR032675 -
Car02g01461 947 Pfam Protein kinase domain 618 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01461 947 ProSiteProfiles Protein kinase domain profile. 617 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01461 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Car02g01461 947 Gene3D Transferase(Phosphotransferase) domain 1 693 910 - -
Car02g01461 947 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Car02g01461 947 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Car02g01461 947 CDD STKc_IRAK 623 889 - -
Car02g01461 947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 919 - -
Car02g01461 947 Gene3D Phosphorylase Kinase; domain 1 587 692 - -
Car02g01461 947 SUPERFAMILY L domain-like 43 412 - -
Car02g01461 947 SMART serkin_6 617 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01461 947 Pfam Leucine rich repeat 296 345 IPR001611 GO:0005515
Car02g01461 947 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 14 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01461 Car-Chr2 41746159 41754097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01461 12 895 Receptor kinase-like Gene Family AT5G01950 57.971 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car02g01461 Pkinase 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01461 - - gmx:100801035 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01461 02 41746159 41754097 Car02g01461 02 41746159 41754097 ECH
Car05g01418 05 58389410 58398547 Car02g01461 02 41746159 41754097 PCT