Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01459 ATGGAAGAGGTTACATTGAATTCAATTGTCAATATCTTATGCGTTACAGTAAAAAAATTCTCCATGAAGTTCTACTCACCTTCATTGCAAGTTTTCCTTTTCACCATTATTATTCTTTCTCCTCTAGTTATTGCTGACCTGAATTCCGACAAGCAAGCCCTTCTTGATTTTGCTTCTGCCATCCCTCATCGTCGCAACCTTAAGTGGGATTCAGCTACCTCAATATGTACAGCTTGGGTAGGCATCACTTGCAATCCAAACCAGACTCGTGTTGTTTCAGTCCGGCTCCCTGGAGTTGGACTAGTAGGCACCATTCCAGCCGATACACTCGGAAAAATTGACTCACTCAAAACTATCAGCCTTCGCTCCAACCTACTCAGTGGAAGTCTACCTCCTGATATTACTTCTCTTCCGTCGCTACAATATCTCTACCTTCAACATAATAACCTTTCAGGCGAAATACCTACCTCATTGTCACCACAACTAAACACACTTGTTTTGTCATACAATTCTTTCACCGGTAGCATTCCAAAGACATTGCAAAACTTAACACAATTAACTAGATTGAGCCTCGAGAACAACTCGCTATCAGGACAGATACCAGATCTTCATGTCGAGCTTAAACATTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGCAAATCTTCGTAGTTTCTCGAGTTCTTCCTTCGAAGGGAATGCTCTCTTATGTGGATTGCCTCTAAAGCCGTGCTCTGTAGTCCCTCCTTCATCTCCTCCTCCTGCATTGGCTCCTGTAAGACACAAGTCCAAAAATAAACTGAGTAAAGCAGCTATCATTGCAATTTCGGTTGGTGGAGCCGTGCTAttgttgctagtagctcttgtcgttgttctttgttgttgttTAAAGAAAAAAGATAATGGAAGTTCTACTGCAAGAGTAATTAAAGCAAAGGGTCCTAGTGGTGGAAGGACCGAAAAACCGAAAGAAGAGTTTGGAAGTGGCGTGCAAGAATCAGAGAAAAACAAATTGGTTTTCTTTGAGGGTTGTTCTTATAATTTTGATCTTGATGATTTGTTGAGAGCTTCGGCGGAGGTTCTTGGAAAGGGTAGTTATGGAACTGCATATAAAGCTATCTTGGAGGAGTCAACAACGGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTTGGCAAGAGGGAATTTGAACAACAGATGGAGATTGTAGGAAGCATTGGACGGCACCCCAATGTCGTTCAGCTTCGCGCTTATTATTATTCGAAGGATGAGAAGCTTTTGGTTTGTGACTATTTCCCAAATGGCAATCTATCTACACTCTTACATGGTACTAGGACAGGTGGAAGAACTACATTAGATTGGAACACGCGAGTAAAAATCACCCTCGGAATCGCGAGAGGAATTGCTCACTTACATTCAGTTGGTGGTCCAAAATTCACACATGGAAATGTGAAATCCTCCAATGTCCTCCTAAACCAAGATAATGACAGCTGCATTTCCGATTTCGGACTGACACCATTTATGAATGTTCCTGCGACCCCTTCTAgagccataggctaccgtgctcctgaggtgattgaaactcggaagcacactcataagtcagacgtgtatagttttggtgtcctacttttggaaatgcttacagggaaagcaccaCAACAGTCTCCGGTACGCGATGACATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTCGGGAGGAGTGGACTGCTGAGGTTTTCGATGTCGAGCTAATGAGGTACCAAAACATTGAAGAAGAGATGGTGCAAATGTTGCAAATTGGAATGGCGTGTGTTGCGAAGGTTCCAGATATGAGGCCTAACATGGAGGAAGTGGTGAGAATGATTGAAGAAATTCGGCAATCTGACTCGGATAACCGACCGTCTTCCGACGAGAATAAATCTAAGGATTTAAATGTTCAAACTCCATGA 1962 0.3925 MEEVTLNSIVNILCVTVKKFSMKFYSPSLQVFLFTIIILSPLVIADLNSDKQALLDFASAIPHRRNLKWDSATSICTAWVGITCNPNQTRVVSVRLPGVGLVGTIPADTLGKIDSLKTISLRSNLLSGSLPPDITSLPSLQYLYLQHNNLSGEIPTSLSPQLNTLVLSYNSFTGSIPKTLQNLTQLTRLSLENNSLSGQIPDLHVELKHLNLSYNHLNGSIPANLRSFSSSSFEGNALLCGLPLKPCSVVPPSSPPPALAPVRHKSKNKLSKAAIIAISVGGAVLLLLVALVVVLCCCLKKKDNGSSTARVIKAKGPSGGRTEKPKEEFGSGVQESEKNKLVFFEGCSYNFDLDDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGSIGRHPNVVQLRAYYYSKDEKLLVCDYFPNGNLSTLLHGTRTGGRTTLDWNTRVKITLGIARGIAHLHSVGGPKFTHGNVKSSNVLLNQDNDSCISDFGLTPFMNVPATPSRAIGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPVRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPNMEEVVRMIEEIRQSDSDNRPSSDENKSKDLNVQTP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01459 653 Pfam Protein kinase domain 361 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01459 653 PANTHER OS05G0588300 PROTEIN 15 653 - -
Car02g01459 653 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Car02g01459 653 SUPERFAMILY Protein kinase-like (PK-like) 362 636 IPR011009 -
Car02g01459 653 Pfam Leucine rich repeat 104 150 IPR001611 GO:0005515
Car02g01459 653 ProSitePatterns Protein kinases ATP-binding region signature. 364 395 IPR017441 GO:0005524
Car02g01459 653 Gene3D Transferase(Phosphotransferase) domain 1 434 652 - -
Car02g01459 653 MobiDBLite consensus disorder prediction 317 332 - -
Car02g01459 653 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Car02g01459 653 MobiDBLite consensus disorder prediction 310 332 - -
Car02g01459 653 Pfam Leucine Rich Repeat 207 226 IPR001611 GO:0005515
Car02g01459 653 Gene3D Ribonuclease Inhibitor 47 204 IPR032675 -
Car02g01459 653 CDD STKc_IRAK 364 629 - -
Car02g01459 653 Gene3D Ribonuclease Inhibitor 207 248 IPR032675 -
Car02g01459 653 ProSiteProfiles Protein kinase domain profile. 358 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01459 653 MobiDBLite consensus disorder prediction 628 644 - -
Car02g01459 653 SUPERFAMILY L domain-like 60 247 - -
Car02g01459 653 MobiDBLite consensus disorder prediction 628 653 - -
Car02g01459 653 PANTHER LRR RECEPTOR-LIKE KINASE 15 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01459 Car-Chr2 41708750 41713524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01459 21 651 Receptor kinase-like Gene Family AT5G58300 67.442 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car02g01459 Pkinase 9.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01459 - - gmx:100818344 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01459 02 41708750 41713524 Car02g01459 02 41708750 41713524 ECH
Car05g01414 05 58249791 58252257 Car02g01459 02 41708750 41713524 PCT