Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01447 ATGGGGATTGAAATTTGCATGAATAGTTTGTGTAAAGATGGTTCTGCTAGTGAATGGAAGAAAGGGTGGCTTTTGATTTCTGGTGGATTTGCTAGACTCTGCAACAAATGCGGACTTGCCTATGAGAATTCAGCTTTCTGTGATAAATTCCACCGTCACGAAGCCGGTTGGAGGGAATGCAGCAATTGCAACAAGCCTATCCATTGTGGATGTATAGTATCAAGGTCTTTGTTTGAGTACCTTGATTTTGGTGGTATAGGTTGTGTTACATGTGTTAAGGCCTCCCAGCTTTGTCCGGATACTGAAAATCCTAATAGGTCTGTTCAATCAACCAAAAATAATGCAAGTGGTTGGTATGCTGAACATATTGATGGTAGACTACCGATGGAACGTGCTGGCAAAGGAAACCTTATGCAATTGTGTAGAATTGTTGAAGCTGGTGAATCAAGCTCTTGGCCACAAGCTCAAAGAAATGGCAAGGTTTCATGTATTGGTTCCAGCAGCCAAGAAGTTAAGTGTCGATTCAGCGAAGAGGATACAGGATTTTTAAATGTGATGAAACATTCTAGTCATTCTTCGAAATTTACTTTGACAGAAAATGATAGACCGACATGGGAGTCTAAAAGTATACATGAACCACTTTCCCTGAATATTTCTCTGGGATCCTCGTCGAGAAATTTTGTGCCTTCTGCCACGGAGATTGTAGAAGGTAGACTTGAGGGTAAAGCATCTTCTCCCTTTCAACAAGGGAAAAAATCTCACCCTATGTTGCCCAAACAAACGAAGACTGGAGTTACCATGAATCTTGAAACAAATAAAGGCATGACTTCTCATGAACGAATTGCGCGGCCACCTCCTGATGGGAAAGGAAAAAACCAGTTACTTTCTCGATACTGGCCGAGGATCACTGATCAAGAGCTGGAGCAATTGTCCGGGGATTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAGGTGTTAAGTCCAAGTGATGCTGGTCGAATTGGTCGTCTTGTCCTCCCAAAAGCCTGTGCTGAGGCTTTTCTCCCTCATATTTCGCAATCAGAAGGTGTTCCTCTAGAGTTCCTAGATTCGAAGGGGGACGAGTGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCTTGCAATTAAATGCTGGTGATACTGTGATATTTAGTCGGATAGATCCTGGGGAAAAATTTGTATTGGGTTTTAGAAAGGCATCAAATTCAATTGATACACAGGATGCCTCTACATCTGCTCATTCCAATGGCATTTCAACAAAGAATACAAATTTTTCTGGTGCAACTAAGAATCTGCTCTCAGTATGTAGTTATCGTGATCTTCTTCAATCAAGGAAAGGTAACGGGGAACCTTACTTAAATGGACATTTAGAACATCTGCGTTTGGGTACTGGAACTTCTGATTGGCTTCAAACCGCACGTTGTGAAGAGGGGACAAACAAGGATCCATTGCAGCCACCGGGTTCAGTTTCAGAAAAGAAGAGGACTCACAATATTGGGCCAAAAACTAAGAGGTTGCTCATTCCTAGTGAAGATGCTAAGGAGTTGAGACTTACATGGGAAGAAGCACAAGACTTGCTTTGTCCGCCGCCTAGTGTCAAGCCAAACATCGTAACAATCGAAGACCAAGTATTTGAAGAATATGATGAGCCCCCAGTTTTTGGAAAGATAACTATAACAAATGCCGGTCCATCTGGGTCTTCGGATTCTGCATCAGAGCAGCTAGAAAATCTTCTGAGAACCAGAAAAGATTCTAAAAAGCGAAAAATTGTAGAAAAGGGTAAAACAATTCAAGAACACAAGCCTTCAGGCCTTGAAGCTCTTGCCAATGCAGCAGTTTTAGGAGATAATCTTGCTGATCCGGACGAGTCATCCTCGGCTGAAGTCACCACCAAACATCCTAGGCATCGTCCGGGATGCACTTGTATCGTTTGCATTCAACCAGCAAGTGGACAAGGAAGACATCCACCAACTTGCACTTGCCTTGCTTGTGAGACTGTGAAGCGTCGGTTCAAGACTCTTATGATGCGTAGAAAAAAGCAACAATCAGAACCTGAAGCAGTTGATGATCAAATTGATCACATGGAGGAGGCTGATACCAATGGTGATGCGTCAAGAGAAGATGCAAGTCACTCGCCGGACGAGGTAAGTGTGAATGGAGGTCAGCTTGAGGCTTCTGAGCCAAGTGGCGCAGGACAAATAGATTTGAATTGTCATCCCAATCATGAAGATATGGAAATGGATACATATAACAGGACTGAGCATGAGTCATGA 2340 0.4295 MGIEICMNSLCKDGSASEWKKGWLLISGGFARLCNKCGLAYENSAFCDKFHRHEAGWRECSNCNKPIHCGCIVSRSLFEYLDFGGIGCVTCVKASQLCPDTENPNRSVQSTKNNASGWYAEHIDGRLPMERAGKGNLMQLCRIVEAGESSSWPQAQRNGKVSCIGSSSQEVKCRFSEEDTGFLNVMKHSSHSSKFTLTENDRPTWESKSIHEPLSLNISLGSSSRNFVPSATEIVEGRLEGKASSPFQQGKKSHPMLPKQTKTGVTMNLETNKGMTSHERIARPPPDGKGKNQLLSRYWPRITDQELEQLSGDLKSTVVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPHISQSEGVPLEFLDSKGDEWTFQFRFWPNNNSRMYVLEGVTPCIQSLQLNAGDTVIFSRIDPGEKFVLGFRKASNSIDTQDASTSAHSNGISTKNTNFSGATKNLLSVCSYRDLLQSRKGNGEPYLNGHLEHLRLGTGTSDWLQTARCEEGTNKDPLQPPGSVSEKKRTHNIGPKTKRLLIPSEDAKELRLTWEEAQDLLCPPPSVKPNIVTIEDQVFEEYDEPPVFGKITITNAGPSGSSDSASEQLENLLRTRKDSKKRKIVEKGKTIQEHKPSGLEALANAAVLGDNLADPDESSSAEVTTKHPRHRPGCTCIVCIQPASGQGRHPPTCTCLACETVKRRFKTLMMRRKKQQSEPEAVDDQIDHMEEADTNGDASREDASHSPDEVSVNGGQLEASEPSGAGQIDLNCHPNHEDMEMDTYNRTEHES 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01447 779 MobiDBLite consensus disorder prediction 719 779 - -
Car02g01447 779 SUPERFAMILY DNA-binding pseudobarrel domain 320 424 IPR015300 -
Car02g01447 779 MobiDBLite consensus disorder prediction 719 735 - -
Car02g01447 779 SMART B3_2 322 423 IPR003340 GO:0003677
Car02g01447 779 Gene3D - 300 427 IPR015300 -
Car02g01447 779 MobiDBLite consensus disorder prediction 761 779 - -
Car02g01447 779 CDD B3_DNA 320 421 IPR003340 GO:0003677
Car02g01447 779 ProSiteProfiles B3 DNA-binding domain profile. 322 423 IPR003340 GO:0003677
Car02g01447 779 MobiDBLite consensus disorder prediction 499 519 - -
Car02g01447 779 Coils Coil 590 610 - -
Car02g01447 779 Pfam B3 DNA binding domain 322 421 IPR003340 GO:0003677
Car02g01447 779 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 591 - -
Car02g01447 779 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 591 773 - -
Car02g01447 779 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 591 773 - -
Car02g01447 779 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 4 591 - -
Car02g01447 779 MobiDBLite consensus disorder prediction 639 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01447 Car-Chr2 41372652 41378186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01447 1 776 B3 DNA Binding Superfamily AT2G30470 42.892 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car02g01447 B3 5.7e-15 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01399 05 58065837 58072786 Car02g01447 02 41372652 41378186 PCT